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  5. Solyc05g015493.1.1

Solyc05g015493.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana (sp|q9zt94|polr2_arath : 160.0)


Gene families : OG0000177 (Archaeplastida) Phylogenetic Tree(s): OG0000177_tree ,
OG_05_0000071 (LandPlants) Phylogenetic Tree(s): OG_05_0000071_tree ,
OG_06_0000026 (SeedPlants) Phylogenetic Tree(s): OG_06_0000026_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g015493.1.1
Cluster HCCA: Cluster_90

Target Alias Description ECC score Gene Family Method Actions
Solyc01g065625.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc01g066445.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc02g062045.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc03g062835.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc06g034395.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.04 Archaeplastida
Solyc06g048825.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.02 Archaeplastida
Solyc06g053665.1.1 No alias No annotation 0.05 Archaeplastida
Solyc06g066853.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.02 Archaeplastida
Solyc08g062725.1.1 No alias No annotation 0.03 Archaeplastida
Solyc10g018203.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc10g038045.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 Archaeplastida
Solyc10g074475.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.02 Archaeplastida
Solyc11g012995.1.1 No alias No annotation 0.03 Archaeplastida
Solyc11g028105.1.1 No alias No annotation 0.02 Archaeplastida
Solyc12g042855.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
BP GO:0009060 aerobic respiration IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!