Solyc05g015510.3.1


Description : transcription factor (SBP)


Gene families : OG0000102 (Archaeplastida) Phylogenetic Tree(s): OG0000102_tree ,
OG_05_0000092 (LandPlants) Phylogenetic Tree(s): OG_05_0000092_tree ,
OG_06_0000075 (SeedPlants) Phylogenetic Tree(s): OG_06_0000075_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g015510.3.1
Cluster HCCA: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00106p00144050 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
AT1G20980 SPL1R2, ATSPL14,... squamosa promoter binding protein-like 14 0.05 Archaeplastida
GSVIVT01018204001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.03 Archaeplastida
GSVIVT01033064001 No alias RNA biosynthesis.transcriptional activation.SBP... 0.05 Archaeplastida
Gb_03921 No alias transcription factor (SBP) 0.02 Archaeplastida
Gb_26600 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g04680.1 No alias transcription factor (SBP) 0.07 Archaeplastida
MA_10429891g0010 No alias transcription factor (SBP) 0.02 Archaeplastida
MA_47367g0010 No alias transcription factor (SBP) 0.03 Archaeplastida
MA_7789506g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c12_24350V3.1 No alias squamosa promoter binding protein-like 8 0.01 Archaeplastida
Pp3c16_7490V3.1 No alias squamosa promoter binding protein-like 2 0.01 Archaeplastida
Pp3c25_8610V3.1 No alias squamosa promoter binding protein-like 8 0.02 Archaeplastida
Pp3c5_22750V3.1 No alias squamosa promoter binding protein-like 8 0.02 Archaeplastida
Zm00001e003571_P002 No alias transcription factor (SBP) 0.02 Archaeplastida
Zm00001e013198_P001 No alias transcription factor (SBP) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0042025 host cell nucleus IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0004334 fumarylacetoacetase activity IEP Neighborhood
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006520 cellular amino acid metabolic process IEP Neighborhood
MF GO:0008289 lipid binding IEP Neighborhood
BP GO:0009072 aromatic amino acid family metabolic process IEP Neighborhood
BP GO:0009719 response to endogenous stimulus IEP Neighborhood
BP GO:0009725 response to hormone IEP Neighborhood
BP GO:0010033 response to organic substance IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP Neighborhood
MF GO:0016822 hydrolase activity, acting on acid carbon-carbon bonds IEP Neighborhood
MF GO:0016823 hydrolase activity, acting on acid carbon-carbon bonds, in ketonic substances IEP Neighborhood
BP GO:0042221 response to chemical IEP Neighborhood
InterPro domains Description Start Stop
IPR004333 SBP_dom 177 250
No external refs found!