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  5. Solyc05g015654.1.1

Solyc05g015654.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE2 OS=Arabidopsis thaliana (sp|q9zt94|polr2_arath : 207.0)


Gene families : OG0012672 (Archaeplastida) Phylogenetic Tree(s): OG0012672_tree ,
OG_05_0012484 (LandPlants) Phylogenetic Tree(s): OG_05_0012484_tree ,
OG_06_0012560 (SeedPlants) Phylogenetic Tree(s): OG_06_0012560_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g015654.1.1
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
Solyc09g061900.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc11g021010.1.1 No alias no hits & (original description: none) 0.09 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR025724 GAG-pre-integrase_dom 451 521
IPR001584 Integrase_cat-core 536 647
No external refs found!