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  5. Solyc05g023730.1.1

Solyc05g023730.1.1


Description : 50S ribosomal protein L2, chloroplastic OS=Nicotiana debneyi (sp|p21434|rk2_nicde : 149.0)


Gene families : OG0000693 (Archaeplastida) Phylogenetic Tree(s): OG0000693_tree ,
OG_05_0000458 (LandPlants) Phylogenetic Tree(s): OG_05_0000458_tree ,
OG_06_0000259 (SeedPlants) Phylogenetic Tree(s): OG_06_0000259_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g023730.1.1
Cluster HCCA: Cluster_194

Target Alias Description ECC score Gene Family Method Actions
Solyc00g500035.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.12 Archaeplastida
Solyc00g500047.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Solanum... 0.14 Archaeplastida
Solyc00g500079.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.12 Archaeplastida
Solyc00g500150.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.05 Archaeplastida
Solyc00g500297.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Nicotiana... 0.12 Archaeplastida
Solyc02g150102.1.1 No alias 50S ribosomal protein L2, chloroplastic OS=Aethionema... 0.08 Archaeplastida
Zm00001e042370_P001 No alias 50S ribosomal protein L2, chloroplastic OS=Sorghum... 0.06 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEA Interproscan
CC GO:0005840 ribosome IEA Interproscan
BP GO:0006412 translation IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR022666 Rbsml_prot_L2_RNA-bd_dom 8 68
No external refs found!