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  5. Solyc05g025953.1.1

Solyc05g025953.1.1


Description : No annotation


Gene families : OG0000940 (Archaeplastida) Phylogenetic Tree(s): OG0000940_tree ,
OG_05_0000578 (LandPlants) Phylogenetic Tree(s): OG_05_0000578_tree ,
OG_06_0000281 (SeedPlants) Phylogenetic Tree(s): OG_06_0000281_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g025953.1.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
Solyc02g077865.1.1 No alias no hits & (original description: none) 0.06 Archaeplastida
Solyc02g090397.1.1 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc04g053033.1.1 No alias No annotation 0.07 Archaeplastida
Solyc05g050887.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc05g051385.1.1 No alias no hits & (original description: none) 0.08 Archaeplastida
Solyc07g009477.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.03 Archaeplastida
Solyc07g015873.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.02 Archaeplastida
Solyc07g018027.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc10g051255.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.05 Archaeplastida
Solyc12g062203.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE2... 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004129 cytochrome-c oxidase activity IEP Neighborhood
BP GO:0009060 aerobic respiration IEP Neighborhood
MF GO:0015002 heme-copper terminal oxidase activity IEP Neighborhood
BP GO:0015980 energy derivation by oxidation of organic compounds IEP Neighborhood
BP GO:0016579 protein deubiquitination IEP Neighborhood
MF GO:0016675 oxidoreductase activity, acting on a heme group of donors IEP Neighborhood
MF GO:0016676 oxidoreductase activity, acting on a heme group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0045333 cellular respiration IEP Neighborhood
BP GO:0070646 protein modification by small protein removal IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!