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  5. Solyc05g026480.2.1

Solyc05g026480.2.1


Description : transcriptional co-repressor (LUG)


Gene families : OG0000691 (Archaeplastida) Phylogenetic Tree(s): OG0000691_tree ,
OG_05_0108990 (LandPlants) Phylogenetic Tree(s): No tree available for this family ,
OG_06_0086808 (SeedPlants) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g026480.2.1
Cluster HCCA: Cluster_281

Target Alias Description ECC score Gene Family Method Actions
AT4G32551 LUG, RON2 LisH dimerisation motif;WD40/YVTN repeat-like-containing domain 0.03 Archaeplastida
Cpa|evm.model.tig00000241.110 No alias No description available 0.01 Archaeplastida
GSVIVT01002210001 No alias RNA biosynthesis.transcriptional repression.LUG... 0.02 Archaeplastida
GSVIVT01002701001 No alias RNA biosynthesis.transcriptional repression.LUG... 0.02 Archaeplastida
LOC_Os01g08190.1 No alias transcriptional co-repressor (LUG) 0.04 Archaeplastida
MA_10428752g0010 No alias transcriptional co-repressor (LUG) 0.07 Archaeplastida
Solyc12g013940.1.1 No alias transcriptional co-repressor (LUG) 0.03 Archaeplastida
Zm00001e020659_P003 No alias transcriptional co-repressor (LUG) 0.03 Archaeplastida
Zm00001e025900_P002 No alias transcriptional co-repressor (LUG) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
CC GO:0030117 membrane coat IEP Neighborhood
CC GO:0030120 vesicle coat IEP Neighborhood
CC GO:0030127 COPII vesicle coat IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0035639 purine ribonucleoside triphosphate binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
BP GO:0048193 Golgi vesicle transport IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001680 WD40_repeat 325 354
IPR001680 WD40_repeat 487 522
IPR001680 WD40_repeat 362 397
No external refs found!