1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00025p00209580

AMTR_s00025p00209580 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.276

Description : Protein translocation.chloroplast.thylakoid membrane Sec1 translocation system.SecE1 component


Gene families : OG0008523 (Archaeplastida) Phylogenetic Tree(s): OG0008523_tree ,
OG_05_0009631 (LandPlants) Phylogenetic Tree(s): OG_05_0009631_tree ,
OG_06_0011237 (SeedPlants) Phylogenetic Tree(s): OG_06_0011237_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00209580
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
AT4G14870 SECE1 secE/sec61-gamma protein transport protein 0.03 Archaeplastida
Cre10.g457650 No alias Protein translocation.chloroplast.thylakoid membrane... 0.04 Archaeplastida
Pp3c2_27330V3.1 No alias secE/sec61-gamma protein transport protein 0.02 Archaeplastida
Zm00001e036355_P002 No alias component SecE1 of thylakoid membrane Sec1 translocation system 0.04 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0006605 protein targeting IEA Interproscan
BP GO:0006886 intracellular protein transport IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
MF GO:0004813 alanine-tRNA ligase activity IEP Neighborhood
CC GO:0005622 intracellular IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006419 alanyl-tRNA aminoacylation IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0008565 protein transporter activity IEP Neighborhood
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Neighborhood
MF GO:0016655 oxidoreductase activity, acting on NAD(P)H, quinone or similar compound as acceptor IEP Neighborhood
MF GO:0016872 intramolecular lyase activity IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Neighborhood
BP GO:0042254 ribosome biogenesis IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0044085 cellular component biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR001901 Translocase_SecE/Sec61-g 108 155
No external refs found!