Solyc05g043420.2.1

Description : Putative late blight resistance protein homolog R1B-17 OS=Solanum demissum (sp|q6l403|r1b17_solde : 355.0)

Gene families : OG0002833 (Archaeplastida) Phylogenetic Tree(s): OG0002833_tree ,
OG_05_0001906 (LandPlants) Phylogenetic Tree(s): OG_05_0001906_tree ,
OG_06_0001059 (SeedPlants) Phylogenetic Tree(s): OG_06_0001059_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g043420.2.1

Target	Alias	Description	ECC score	Gene Family Method
Solyc04g008120.3.1	No alias	Putative late blight resistance protein homolog R1B-16...	0.04	Archaeplastida
Solyc04g008205.1.1	No alias	no hits & (original description: none)	0.06	Archaeplastida
Solyc05g009740.1.1	No alias	Putative late blight resistance protein homolog R1A-6...	0.03	Archaeplastida
Solyc05g009750.1.1	No alias	Putative late blight resistance protein homolog R1B-12...	0.03	Archaeplastida
Solyc05g009760.3.1	No alias	Putative late blight resistance protein homolog R1B-16...	0.02	Archaeplastida
Solyc05g042110.1.1	No alias	no hits & (original description: none)	0.01	Archaeplastida
Solyc05g044490.3.1	No alias	Late blight resistance protein R1-A OS=Solanum demissum...	0.03	Archaeplastida
Solyc05g053980.1.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Solyc05g054010.4.1	No alias	no hits & (original description: none)	0.05	Archaeplastida
Solyc05g054020.3.1	No alias	Putative late blight resistance protein homolog R1B-16...	0.1	Archaeplastida
Solyc05g054340.4.1	No alias	no hits & (original description: none)	0.06	Archaeplastida
Solyc06g008785.1.1	No alias	Putative late blight resistance protein homolog R1B-17...	0.04	Archaeplastida
Solyc06g064720.1.1	No alias	Putative late blight resistance protein homolog R1B-12...	0.25	Archaeplastida
Solyc06g064750.1.1	No alias	Putative late blight resistance protein homolog R1B-12...	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006812	cation transport	IEP	Neighborhood
MF	GO:0008324	cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015075	ion transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015077	monovalent inorganic cation transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015078	proton transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015291	secondary active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0015297	antiporter activity	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022804	active transmembrane transporter activity	IEP	Neighborhood
MF	GO:0022890	inorganic cation transmembrane transporter activity	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	543	780

External Links

No external refs found!