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  5. Solyc05g050560.1.1

Solyc05g050560.1.1


Description : transcription factor (bHLH)


Gene families : OG0000688 (Archaeplastida) Phylogenetic Tree(s): OG0000688_tree ,
OG_05_0000488 (LandPlants) Phylogenetic Tree(s): OG_05_0000488_tree ,
OG_06_0002597 (SeedPlants) Phylogenetic Tree(s): OG_06_0002597_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g050560.1.1
Cluster HCCA: Cluster_42

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00225810 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AMTR_s00021p00226670 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00099p00127980 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.02 Archaeplastida
AT1G01260 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 Archaeplastida
AT1G32640 ATMYC2, MYC2,... Basic helix-loop-helix (bHLH) DNA-binding family protein 0.06 Archaeplastida
AT2G46510 AIB, ATAIB ABA-inducible BHLH-type transcription factor 0.1 Archaeplastida
AT4G17880 No alias Basic helix-loop-helix (bHLH) DNA-binding family protein 0.03 Archaeplastida
GSVIVT01027412001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_10001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Gb_17737 No alias transcription factor (bHLH) 0.03 Archaeplastida
Gb_36294 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os01g50940.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
LOC_Os10g42430.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
MA_5838g0020 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e002421_P001 No alias transcription factor (bHLH) 0.05 Archaeplastida
Zm00001e020021_P001 No alias transcription factor (bHLH) 0.06 Archaeplastida
Zm00001e037785_P002 No alias transcription factor (bHLH) 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004177 aminopeptidase activity IEP Neighborhood
MF GO:0005096 GTPase activator activity IEP Neighborhood
MF GO:0005506 iron ion binding IEP Neighborhood
MF GO:0008047 enzyme activator activity IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
MF GO:0010181 FMN binding IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
MF GO:0016491 oxidoreductase activity IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
MF GO:0020037 heme binding IEP Neighborhood
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
MF GO:0046906 tetrapyrrole binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 432 478
IPR025610 MYC/MYB_N 45 233
No external refs found!