1. Home
  2. Species
  3. Amborella trichopoda
  4. Sequence
  5. AMTR_s00025p00220320

AMTR_s00025p00220320 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.307

Description : Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase


Gene families : OG0000370 (Archaeplastida) Phylogenetic Tree(s): OG0000370_tree ,
OG_05_0000247 (LandPlants) Phylogenetic Tree(s): OG_05_0000247_tree ,
OG_06_0000469 (SeedPlants) Phylogenetic Tree(s): OG_06_0000469_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00220320
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00104p00085600 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 Archaeplastida
AMTR_s00131p00072670 evm_27.TU.AmTr_v1... Enzyme classification.EC_3 hydrolases.EC_3.2 glycosylase 0.04 Archaeplastida
AT1G64760 No alias O-Glycosyl hydrolases family 17 protein 0.02 Archaeplastida
AT5G20870 No alias O-Glycosyl hydrolases family 17 protein 0.03 Archaeplastida
GSVIVT01014995001 No alias Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_05521 No alias Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.02 Archaeplastida
Gb_21213 No alias Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis... 0.03 Archaeplastida
Gb_30517 No alias Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os06g39060.1 No alias Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.03 Archaeplastida
LOC_Os07g07340.1 No alias Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.02 Archaeplastida
Pp3c21_6460V3.1 No alias O-Glycosyl hydrolases family 17 protein 0.02 Archaeplastida
Pp3c22_2470V3.1 No alias O-Glycosyl hydrolases family 17 protein 0.03 Archaeplastida
Smo86140 No alias Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis thaliana 0.02 Archaeplastida
Solyc03g058450.4.1 No alias Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.03 Archaeplastida
Solyc05g025500.3.1 No alias Glucan endo-1,3-beta-glucosidase 6 OS=Arabidopsis... 0.04 Archaeplastida
Solyc07g017730.3.1 No alias Glucan endo-1,3-beta-glucosidase 5 OS=Arabidopsis... 0.04 Archaeplastida
Solyc11g012030.2.1 No alias Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.03 Archaeplastida
Zm00001e037386_P001 No alias Glucan endo-1,3-beta-glucosidase 8 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e038397_P002 No alias Glucan endo-1,3-beta-glucosidase 9 OS=Arabidopsis... 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA Interproscan
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000075 cell cycle checkpoint IEP Neighborhood
BP GO:0000077 DNA damage checkpoint IEP Neighborhood
CC GO:0000786 nucleosome IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006184 obsolete GTP catabolic process IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006334 nucleosome assembly IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0009250 glucan biosynthetic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0016043 cellular component organization IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
BP GO:0016998 cell wall macromolecule catabolic process IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022607 cellular component assembly IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
CC GO:0030896 checkpoint clamp complex IEP Neighborhood
BP GO:0031570 DNA integrity checkpoint IEP Neighborhood
CC GO:0032993 protein-DNA complex IEP Neighborhood
BP GO:0034622 cellular protein-containing complex assembly IEP Neighborhood
BP GO:0034728 nucleosome organization IEP Neighborhood
MF GO:0035251 UDP-glucosyltransferase activity IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
BP GO:0043086 negative regulation of catalytic activity IEP Neighborhood
BP GO:0043170 macromolecule metabolic process IEP Neighborhood
BP GO:0043933 protein-containing complex subunit organization IEP Neighborhood
BP GO:0044036 cell wall macromolecule metabolic process IEP Neighborhood
BP GO:0044092 negative regulation of molecular function IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
CC GO:0044427 chromosomal part IEP Neighborhood
CC GO:0044454 nuclear chromosome part IEP Neighborhood
CC GO:0044464 cell part IEP Neighborhood
CC GO:0044815 DNA packaging complex IEP Neighborhood
BP GO:0045786 negative regulation of cell cycle IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0048523 negative regulation of cellular process IEP Neighborhood
BP GO:0050790 regulation of catalytic activity IEP Neighborhood
BP GO:0051258 protein polymerization IEP Neighborhood
BP GO:0051273 beta-glucan metabolic process IEP Neighborhood
BP GO:0051274 beta-glucan biosynthetic process IEP Neighborhood
BP GO:0051726 regulation of cell cycle IEP Neighborhood
BP GO:0065003 protein-containing complex assembly IEP Neighborhood
BP GO:0065004 protein-DNA complex assembly IEP Neighborhood
BP GO:0065009 regulation of molecular function IEP Neighborhood
BP GO:0071824 protein-DNA complex subunit organization IEP Neighborhood
BP GO:0071840 cellular component organization or biogenesis IEP Neighborhood
InterPro domains Description Start Stop
IPR000490 Glyco_hydro_17 24 340
IPR012946 X8 359 427
No external refs found!