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  5. Solyc05g051340.3.1

Solyc05g051340.3.1


Description : group-II intron mitochondrial splicing factor (MISF26)


Gene families : OG0009135 (Archaeplastida) Phylogenetic Tree(s): OG0009135_tree ,
OG_05_0009415 (LandPlants) Phylogenetic Tree(s): OG_05_0009415_tree ,
OG_06_0001824 (SeedPlants) Phylogenetic Tree(s): OG_06_0001824_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g051340.3.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
Gb_13926 No alias group-II intron mitochondrial splicing factor (MISF26) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0008234 cysteine-type peptidase activity IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 364 420
IPR002885 Pentatricopeptide_repeat 277 303
IPR002885 Pentatricopeptide_repeat 317 339
IPR002885 Pentatricopeptide_repeat 446 494
IPR002885 Pentatricopeptide_repeat 204 250
No external refs found!