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  5. Solyc05g051420.2.1

Solyc05g051420.2.1


Description : transcription factor (zf-HD)


Gene families : OG0000209 (Archaeplastida) Phylogenetic Tree(s): OG0000209_tree ,
OG_05_0000122 (LandPlants) Phylogenetic Tree(s): OG_05_0000122_tree ,
OG_06_0000088 (SeedPlants) Phylogenetic Tree(s): OG_06_0000088_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g051420.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00070p00154800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.HB... 0.02 Archaeplastida
AT2G18350 AtHB24, ZHD6, HB24 homeobox protein 24 0.06 Archaeplastida
GSVIVT01011413001 No alias RNA biosynthesis.transcriptional activation.HB... 0.03 Archaeplastida
LOC_Os08g34010.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os09g24820.1 No alias transcription factor (zf-HD) 0.07 Archaeplastida
LOC_Os09g29130.1 No alias transcription factor (zf-HD) 0.03 Archaeplastida
LOC_Os11g03420.1 No alias transcription factor (zf-HD) 0.05 Archaeplastida
LOC_Os12g10630.1 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_19630g0020 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_461761g0010 No alias transcription factor (zf-HD) 0.02 Archaeplastida
MA_97909g0010 No alias transcription factor (zf-HD) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
CC GO:0044424 intracellular part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 3 49
No external refs found!