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Description : transcription factor (MADS/AGL)
Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc05g051825.1.1 | |
| Cluster | HCCA: Cluster_41 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00010p00214260 | evm_27.TU.AmTr_v1... | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | Archaeplastida | |
| AT1G24260 | AGL9, SEP3 | K-box region and MADS-box transcription factor family protein | 0.03 | Archaeplastida | |
| AT1G77980 | AGL66 | AGAMOUS-like 66 | 0.03 | Archaeplastida | |
| AT3G54340 | AP3, ATAP3 | K-box region and MADS-box transcription factor family protein | 0.02 | Archaeplastida | |
| AT5G20240 | PI | K-box region and MADS-box transcription factor family protein | 0.03 | Archaeplastida | |
| Cpa|evm.model.tig00000944.9 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.01 | Archaeplastida | |
| GSVIVT01000802001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | Archaeplastida | |
| GSVIVT01021534001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.03 | Archaeplastida | |
| Gb_03068 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Gb_12581 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| Gb_28587 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| LOC_Os04g49150.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| LOC_Os08g38590.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| MA_10332736g0010 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida | |
| Zm00001e026007_P004 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
| Zm00001e032487_P001 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Zm00001e036127_P002 | No alias | transcription factor (MADS/AGL) | 0.04 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0016837 | carbon-oxygen lyase activity, acting on polysaccharides | IEP | Neighborhood |
| MF | GO:0030570 | pectate lyase activity | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 10 | 57 |
| No external refs found! |