Solyc05g052160.4.1


Description : component Toc33|Toc34 of outer envelope TOC translocation system


Gene families : OG0002677 (Archaeplastida) Phylogenetic Tree(s): OG0002677_tree ,
OG_05_0004306 (LandPlants) Phylogenetic Tree(s): OG_05_0004306_tree ,
OG_06_0005441 (SeedPlants) Phylogenetic Tree(s): OG_06_0005441_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g052160.4.1
Cluster HCCA: Cluster_173

Target Alias Description ECC score Gene Family Method Actions
Cre06.g252200 No alias Protein translocation.chloroplast.outer envelope TOC... 0.02 Archaeplastida
Pp3c5_2650V3.1 No alias translocon at the outer envelope membrane of chloroplasts 34 0.04 Archaeplastida
Zm00001e000998_P001 No alias component Toc33|Toc34 of outer envelope TOC translocation system 0.07 Archaeplastida
Zm00001e038614_P003 No alias component Toc33|Toc34 of outer envelope TOC translocation system 0.07 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005525 GTP binding IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003729 mRNA binding IEP Neighborhood
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Neighborhood
CC GO:0005849 mRNA cleavage factor complex IEP Neighborhood
BP GO:0006139 nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0006260 DNA replication IEP Neighborhood
BP GO:0006378 mRNA polyadenylation IEP Neighborhood
BP GO:0006396 RNA processing IEP Neighborhood
BP GO:0006397 mRNA processing IEP Neighborhood
BP GO:0006725 cellular aromatic compound metabolic process IEP Neighborhood
BP GO:0009892 negative regulation of metabolic process IEP Neighborhood
BP GO:0010605 negative regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010629 negative regulation of gene expression IEP Neighborhood
BP GO:0016070 RNA metabolic process IEP Neighborhood
BP GO:0016071 mRNA metabolic process IEP Neighborhood
BP GO:0016458 gene silencing IEP Neighborhood
MF GO:0016859 cis-trans isomerase activity IEP Neighborhood
CC GO:0019867 outer membrane IEP Neighborhood
BP GO:0031047 gene silencing by RNA IEP Neighborhood
BP GO:0031123 RNA 3'-end processing IEP Neighborhood
BP GO:0031124 mRNA 3'-end processing IEP Neighborhood
BP GO:0034641 cellular nitrogen compound metabolic process IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
CC GO:0044451 nucleoplasm part IEP Neighborhood
BP GO:0046483 heterocycle metabolic process IEP Neighborhood
BP GO:0048519 negative regulation of biological process IEP Neighborhood
BP GO:0090304 nucleic acid metabolic process IEP Neighborhood
BP GO:1901360 organic cyclic compound metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006703 G_AIG1 39 227
No external refs found!