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  5. AMTR_s00025p00225100

AMTR_s00025p00225100 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.317

No description available


Gene families : OG0000178 (Archaeplastida) Phylogenetic Tree(s): OG0000178_tree ,
OG_05_0000118 (LandPlants) Phylogenetic Tree(s): OG_05_0000118_tree ,
OG_06_0000057 (SeedPlants) Phylogenetic Tree(s): OG_06_0000057_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00225100
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
AT3G13010 No alias hAT transposon superfamily protein 0.1 Archaeplastida
Gb_15346 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_26442 No alias no hits & (original description: none) 0.04 Archaeplastida
Gb_34770 No alias no hits & (original description: none) 0.05 Archaeplastida
Solyc09g005650.1.1 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0005488 binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
MF GO:0046983 protein dimerization activity IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!