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  5. Solyc05g052410.3.1

Solyc05g052410.3.1


Description : transcription factor (DREB)


Gene families : OG0000003 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0000001 (LandPlants) Phylogenetic Tree(s): OG_05_0000001_tree ,
OG_06_0000734 (SeedPlants) Phylogenetic Tree(s): OG_06_0000734_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g052410.3.1
Cluster HCCA: Cluster_214

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00147970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00016p00238800 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
AMTR_s00069p00132820 evm_27.TU.AmTr_v1... External stimuli response.biotic... 0.03 Archaeplastida
AT1G04370 ERF14, ATERF14 Ethylene-responsive element binding factor 14 0.04 Archaeplastida
AT1G21910 DREB26 Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
AT1G22190 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT1G78080 RAP2.4 related to AP2 4 0.03 Archaeplastida
AT2G44840 ATERF13, ERF13, EREBP ethylene-responsive element binding factor 13 0.04 Archaeplastida
AT3G25890 No alias Integrase-type DNA-binding superfamily protein 0.06 Archaeplastida
AT3G60490 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
AT4G18450 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT4G36900 DEAR4, RAP2.10 related to AP2 10 0.04 Archaeplastida
AT4G39780 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G07310 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
AT5G61890 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Cre08.g364400 No alias No description available 0.01 Archaeplastida
GSVIVT01001089001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01002195001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01008649001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.04 Archaeplastida
GSVIVT01015540001 No alias Cell wall.cutin and suberin.biosynthesis... 0.05 Archaeplastida
GSVIVT01018271001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
GSVIVT01021146001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01028314001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.02 Archaeplastida
GSVIVT01028315001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 Archaeplastida
GSVIVT01032961001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Gb_26667 No alias transcription factor (ERF) 0.03 Archaeplastida
LOC_Os03g08460.1 No alias Ethylene-responsive transcription factor ERF073... 0.02 Archaeplastida
LOC_Os04g46250.1 No alias transcription factor (ERF) 0.02 Archaeplastida
LOC_Os06g11940.1 No alias Ethylene-responsive transcription factor ERF017... 0.03 Archaeplastida
MA_10031781g0010 No alias transcription factor (ERF) 0.05 Archaeplastida
MA_135279g0010 No alias transcription factor (ERF) 0.05 Archaeplastida
MA_203191g0010 No alias transcription factor (ERF) 0.03 Archaeplastida
MA_3405g0010 No alias transcription factor (ERF) 0.05 Archaeplastida
MA_502153g0010 No alias transcription factor (ERF) 0.05 Archaeplastida
MA_84578g0010 No alias transcription factor (ERF) 0.06 Archaeplastida
MA_94228g0010 No alias transcription factor (ERF). SHN-type cutin and suberin... 0.04 Archaeplastida
MA_9588449g0010 No alias no hits & (original description: none) 0.05 Archaeplastida
Pp3c10_11910V3.1 No alias Integrase-type DNA-binding superfamily protein 0.02 Archaeplastida
Pp3c10_7030V3.1 No alias Integrase-type DNA-binding superfamily protein 0.06 Archaeplastida
Pp3c1_27710V3.1 No alias cytokinin response factor 2 0.04 Archaeplastida
Pp3c4_25130V3.1 No alias Integrase-type DNA-binding superfamily protein 0.04 Archaeplastida
Pp3c4_2680V3.1 No alias Integrase-type DNA-binding superfamily protein 0.03 Archaeplastida
Smo104980 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 Archaeplastida
Smo409196 No alias External stimuli response.biotic... 0.02 Archaeplastida
Zm00001e000609_P001 No alias transcription factor (ERF) 0.06 Archaeplastida
Zm00001e001139_P001 No alias Ethylene-responsive transcription factor ERF014... 0.04 Archaeplastida
Zm00001e002358_P001 No alias transcription factor (ERF) 0.03 Archaeplastida
Zm00001e008306_P001 No alias transcription factor (ERF) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of transcription, DNA-templated IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003746 translation elongation factor activity IEP Neighborhood
CC GO:0005779 integral component of peroxisomal membrane IEP Neighborhood
BP GO:0006417 regulation of translation IEP Neighborhood
BP GO:0006448 regulation of translational elongation IEP Neighborhood
BP GO:0006449 regulation of translational termination IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
BP GO:0006996 organelle organization IEP Neighborhood
MF GO:0008135 translation factor activity, RNA binding IEP Neighborhood
BP GO:0009891 positive regulation of biosynthetic process IEP Neighborhood
BP GO:0009893 positive regulation of metabolic process IEP Neighborhood
BP GO:0010557 positive regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0010604 positive regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0010608 posttranscriptional regulation of gene expression IEP Neighborhood
BP GO:0010628 positive regulation of gene expression IEP Neighborhood
BP GO:0016559 peroxisome fission IEP Neighborhood
MF GO:0016758 transferase activity, transferring hexosyl groups IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0030259 lipid glycosylation IEP Neighborhood
CC GO:0031231 intrinsic component of peroxisomal membrane IEP Neighborhood
CC GO:0031300 intrinsic component of organelle membrane IEP Neighborhood
CC GO:0031301 integral component of organelle membrane IEP Neighborhood
BP GO:0031325 positive regulation of cellular metabolic process IEP Neighborhood
BP GO:0031328 positive regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0032268 regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0032270 positive regulation of cellular protein metabolic process IEP Neighborhood
BP GO:0034248 regulation of cellular amide metabolic process IEP Neighborhood
BP GO:0034250 positive regulation of cellular amide metabolic process IEP Neighborhood
MF GO:0043021 ribonucleoprotein complex binding IEP Neighborhood
MF GO:0043022 ribosome binding IEP Neighborhood
BP GO:0043243 positive regulation of protein complex disassembly IEP Neighborhood
BP GO:0043244 regulation of protein complex disassembly IEP Neighborhood
CC GO:0044438 microbody part IEP Neighborhood
CC GO:0044439 peroxisomal part IEP Neighborhood
MF GO:0044877 protein-containing complex binding IEP Neighborhood
BP GO:0045727 positive regulation of translation IEP Neighborhood
BP GO:0045901 positive regulation of translational elongation IEP Neighborhood
BP GO:0045905 positive regulation of translational termination IEP Neighborhood
BP GO:0048285 organelle fission IEP Neighborhood
BP GO:0048518 positive regulation of biological process IEP Neighborhood
BP GO:0048522 positive regulation of cellular process IEP Neighborhood
BP GO:0051128 regulation of cellular component organization IEP Neighborhood
BP GO:0051130 positive regulation of cellular component organization IEP Neighborhood
BP GO:0051173 positive regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051246 regulation of protein metabolic process IEP Neighborhood
BP GO:0051247 positive regulation of protein metabolic process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 72 122
No external refs found!