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  5. Solyc05g052620.4.1

Solyc05g052620.4.1


Description : No annotation


Gene families : OG0000271 (Archaeplastida) Phylogenetic Tree(s): OG0000271_tree ,
OG_05_0001142 (LandPlants) Phylogenetic Tree(s): OG_05_0001142_tree ,
OG_06_0003204 (SeedPlants) Phylogenetic Tree(s): OG_06_0003204_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g052620.4.1
Cluster HCCA: Cluster_88

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01023363001 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_04515 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.04 Archaeplastida
Gb_04516 No alias component TIR1/AFB of auxin receptor complex. component... 0.04 Archaeplastida
Gb_30742 No alias Protein TRANSPORT INHIBITOR RESPONSE 1 OS=Arabidopsis... 0.07 Archaeplastida
MA_10436355g0010 No alias Coronatine-insensitive protein 1 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_63733g0010 No alias Coronatine-insensitive protein homolog 1a OS=Oryza... 0.05 Archaeplastida
MA_78902g0010 No alias component TIR1/AFB of auxin receptor complex 0.03 Archaeplastida
Solyc02g079190.3.1 No alias component TIR1/AFB of auxin receptor complex. component... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!