Description : A-class RAB GTPase
Gene families : OG0000173 (Archaeplastida) Phylogenetic Tree(s): OG0000173_tree ,
OG_05_0000161 (LandPlants) Phylogenetic Tree(s): OG_05_0000161_tree ,
OG_06_0000127 (SeedPlants) Phylogenetic Tree(s): OG_06_0000127_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc05g052900.3.1 | |
Cluster | HCCA: Cluster_41 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT1G01200 | RABA3, ATRAB-A3, ATRABA3 | RAB GTPase homolog A3 | 0.03 | Archaeplastida | |
Cpa|evm.model.tig00020961.97 | No alias | Vesicle trafficking.regulation of membrane tethering and... | 0.01 | Archaeplastida | |
Cre03.g189250 | No alias | Vesicle trafficking.regulation of membrane tethering and... | 0.02 | Archaeplastida | |
Gb_03447 | No alias | A-class RAB GTPase | 0.02 | Archaeplastida | |
MA_15386g0010 | No alias | A-class RAB GTPase | 0.03 | Archaeplastida | |
MA_59492g0010 | No alias | A-class RAB GTPase | 0.02 | Archaeplastida | |
Pp3c14_15310V3.1 | No alias | RAB GTPase homolog A2B | 0.02 | Archaeplastida | |
Pp3c23_7840V3.1 | No alias | RAB GTPase homolog A4D | 0.01 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0003924 | GTPase activity | IEA | Interproscan |
MF | GO:0005525 | GTP binding | IEA | Interproscan |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
CC | GO:0005856 | cytoskeleton | IEP | Neighborhood |
CC | GO:0005885 | Arp2/3 protein complex | IEP | Neighborhood |
BP | GO:0006694 | steroid biosynthetic process | IEP | Neighborhood |
BP | GO:0007015 | actin filament organization | IEP | Neighborhood |
BP | GO:0008064 | regulation of actin polymerization or depolymerization | IEP | Neighborhood |
BP | GO:0008202 | steroid metabolic process | IEP | Neighborhood |
MF | GO:0008289 | lipid binding | IEP | Neighborhood |
BP | GO:0010638 | positive regulation of organelle organization | IEP | Neighborhood |
CC | GO:0016459 | myosin complex | IEP | Neighborhood |
BP | GO:0030832 | regulation of actin filament length | IEP | Neighborhood |
BP | GO:0030833 | regulation of actin filament polymerization | IEP | Neighborhood |
BP | GO:0030838 | positive regulation of actin filament polymerization | IEP | Neighborhood |
BP | GO:0031334 | positive regulation of protein complex assembly | IEP | Neighborhood |
BP | GO:0032271 | regulation of protein polymerization | IEP | Neighborhood |
BP | GO:0032273 | positive regulation of protein polymerization | IEP | Neighborhood |
BP | GO:0032535 | regulation of cellular component size | IEP | Neighborhood |
BP | GO:0032956 | regulation of actin cytoskeleton organization | IEP | Neighborhood |
BP | GO:0032970 | regulation of actin filament-based process | IEP | Neighborhood |
BP | GO:0033043 | regulation of organelle organization | IEP | Neighborhood |
BP | GO:0034314 | Arp2/3 complex-mediated actin nucleation | IEP | Neighborhood |
BP | GO:0043254 | regulation of protein complex assembly | IEP | Neighborhood |
BP | GO:0044087 | regulation of cellular component biogenesis | IEP | Neighborhood |
BP | GO:0044089 | positive regulation of cellular component biogenesis | IEP | Neighborhood |
CC | GO:0044430 | cytoskeletal part | IEP | Neighborhood |
BP | GO:0045010 | actin nucleation | IEP | Neighborhood |
BP | GO:0048522 | positive regulation of cellular process | IEP | Neighborhood |
BP | GO:0051128 | regulation of cellular component organization | IEP | Neighborhood |
BP | GO:0051130 | positive regulation of cellular component organization | IEP | Neighborhood |
BP | GO:0051493 | regulation of cytoskeleton organization | IEP | Neighborhood |
BP | GO:0051495 | positive regulation of cytoskeleton organization | IEP | Neighborhood |
BP | GO:0090066 | regulation of anatomical structure size | IEP | Neighborhood |
BP | GO:0097435 | supramolecular fiber organization | IEP | Neighborhood |
BP | GO:0110053 | regulation of actin filament organization | IEP | Neighborhood |
BP | GO:1902903 | regulation of supramolecular fiber organization | IEP | Neighborhood |
BP | GO:1902905 | positive regulation of supramolecular fiber organization | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR001806 | Small_GTPase | 14 | 174 |
No external refs found! |