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  5. Solyc05g052950.4.1

Solyc05g052950.4.1


Description : Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana (sp|q9fn03|uvr8_arath : 133.0)


Gene families : OG0005082 (Archaeplastida) Phylogenetic Tree(s): OG0005082_tree ,
OG_05_0004153 (LandPlants) Phylogenetic Tree(s): OG_05_0004153_tree ,
OG_06_0004501 (SeedPlants) Phylogenetic Tree(s): OG_06_0004501_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g052950.4.1
Cluster HCCA: Cluster_147

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01016476001 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana 0.11 Archaeplastida
Gb_14056 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.06 Archaeplastida
LOC_Os05g38270.1 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.07 Archaeplastida
Mp7g16270.1 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e019289_P001 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.08 Archaeplastida
Zm00001e028756_P001 No alias Ultraviolet-B receptor UVR8 OS=Arabidopsis thaliana... 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0016887 ATPase activity IEP Neighborhood
BP GO:0035556 intracellular signal transduction IEP Neighborhood
InterPro domains Description Start Stop
IPR000408 Reg_chr_condens 426 472
IPR000408 Reg_chr_condens 370 421
IPR000408 Reg_chr_condens 319 367
No external refs found!