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  5. Solyc05g052980.4.1

Solyc05g052980.4.1


Description : clade A phosphatase


Gene families : OG0000427 (Archaeplastida) Phylogenetic Tree(s): OG0000427_tree ,
OG_05_0000300 (LandPlants) Phylogenetic Tree(s): OG_05_0000300_tree ,
OG_06_0000745 (SeedPlants) Phylogenetic Tree(s): OG_06_0000745_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g052980.4.1
Cluster HCCA: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
AT1G07430 HAI2 highly ABA-induced PP2C gene 2 0.04 Archaeplastida
AT1G17550 HAB2 homology to ABI2 0.06 Archaeplastida
AT1G72770 HAB1 homology to ABI1 0.03 Archaeplastida
AT2G29380 HAI3 highly ABA-induced PP2C gene 3 0.02 Archaeplastida
AT3G11410 PP2CA, ATPP2CA, AHG3 protein phosphatase 2CA 0.05 Archaeplastida
AT4G26080 AtABI1, ABI1 Protein phosphatase 2C family protein 0.03 Archaeplastida
AT5G57050 AtABI2, ABI2 Protein phosphatase 2C family protein 0.04 Archaeplastida
AT5G59220 HAI1 highly ABA-induced PP2C gene 1 0.05 Archaeplastida
GSVIVT01015308001 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 Archaeplastida
GSVIVT01028698001 No alias Protein modification.dephosphorylation.serine/threonine... 0.03 Archaeplastida
Gb_35708 No alias regulatory phosphatase component of cytoplasm-localized... 0.02 Archaeplastida
LOC_Os01g40094.1 No alias regulatory phosphatase component of cytoplasm-localized... 0.03 Archaeplastida
LOC_Os01g62760.1 No alias clade A phosphatase 0.03 Archaeplastida
LOC_Os03g16170.1 No alias clade A phosphatase 0.04 Archaeplastida
LOC_Os05g46040.1 No alias regulatory phosphatase component of cytoplasm-localized... 0.02 Archaeplastida
LOC_Os09g15670.1 No alias clade A phosphatase 0.02 Archaeplastida
MA_2584g0010 No alias regulatory phosphatase component of cytoplasm-localized... 0.02 Archaeplastida
Zm00001e001189_P001 No alias clade A phosphatase 0.05 Archaeplastida
Zm00001e019296_P001 No alias clade A phosphatase 0.03 Archaeplastida
Zm00001e027694_P002 No alias regulatory phosphatase component of cytoplasm-localized... 0.06 Archaeplastida
Zm00001e032262_P002 No alias regulatory phosphatase component of cytoplasm-localized... 0.03 Archaeplastida
Zm00001e040615_P003 No alias clade A phosphatase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004652 polynucleotide adenylyltransferase activity IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006952 defense response IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016779 nucleotidyltransferase activity IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0043565 sequence-specific DNA binding IEP Neighborhood
BP GO:0043631 RNA polyadenylation IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
MF GO:0070566 adenylyltransferase activity IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase_dom 108 377
No external refs found!