Solyc05g053560.4.1

Description : mannan synthase (CSLD)

Gene families : OG0001034 (Archaeplastida) Phylogenetic Tree(s): OG0001034_tree ,
OG_05_0000623 (LandPlants) Phylogenetic Tree(s): OG_05_0000623_tree ,
OG_06_0000677 (SeedPlants) Phylogenetic Tree(s): OG_06_0000677_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc05g053560.4.1
Cluster	HCCA: Cluster_180

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00019p00246190	evm_27.TU.AmTr_v1...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.05	Archaeplastida
AMTR_s00022p00129900	evm_27.TU.AmTr_v1...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.05	Archaeplastida
AMTR_s00048p00116140	evm_27.TU.AmTr_v1...	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	Archaeplastida
AT4G38190	ATCSLD4, CSLD4	cellulose synthase like D4	0.05	Archaeplastida
GSVIVT01013057001	No alias	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	Archaeplastida
GSVIVT01021798001	No alias	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.04	Archaeplastida
GSVIVT01024398001	No alias	Cell wall.hemicellulose.heteromannan.synthesis.mannan...	0.03	Archaeplastida
LOC_Os06g02180.1	No alias	mannan synthase (CSLD)	0.05	Archaeplastida
LOC_Os06g22980.1	No alias	mannan synthase (CSLD)	0.06	Archaeplastida
MA_595526g0010	No alias	mannan synthase (CSLD)	0.02	Archaeplastida
Pp3c14_26100V3.1	No alias	cellulose synthase-like D3	0.02	Archaeplastida
Pp3c17_22380V3.1	No alias	cellulose synthase-like D3	0.02	Archaeplastida
Pp3c1_41250V3.1	No alias	cellulose synthase-like D3	0.02	Archaeplastida
Pp3c2_1280V3.1	No alias	cellulose synthase-like D3	0.02	Archaeplastida
Pp3c2_1330V3.1	No alias	cellulose synthase-like D3	0.04	Archaeplastida
Zm00001e004304_P002	No alias	mannan synthase (CSLD)	0.06	Archaeplastida
Zm00001e036680_P001	No alias	mannan synthase (CSLD)	0.03	Archaeplastida
Zm00001e037015_P002	No alias	mannan synthase (CSLD)	0.05	Archaeplastida

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	transferase activity, transferring glycosyl groups	None	Extended
MF	GO:0016758	transferase activity, transferring hexosyl groups	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000145	exocyst	IEP	Neighborhood
MF	GO:0003779	actin binding	IEP	Neighborhood
MF	GO:0005488	binding	IEP	Neighborhood
MF	GO:0005543	phospholipid binding	IEP	Neighborhood
BP	GO:0006650	glycerophospholipid metabolic process	IEP	Neighborhood
BP	GO:0006810	transport	IEP	Neighborhood
BP	GO:0006811	ion transport	IEP	Neighborhood
BP	GO:0006820	anion transport	IEP	Neighborhood
BP	GO:0006835	dicarboxylic acid transport	IEP	Neighborhood
BP	GO:0006887	exocytosis	IEP	Neighborhood
MF	GO:0008092	cytoskeletal protein binding	IEP	Neighborhood
MF	GO:0008289	lipid binding	IEP	Neighborhood
MF	GO:0015298	solute:cation antiporter activity	IEP	Neighborhood
MF	GO:0015299	solute:proton antiporter activity	IEP	Neighborhood
BP	GO:0015711	organic anion transport	IEP	Neighborhood
BP	GO:0015740	C4-dicarboxylate transport	IEP	Neighborhood
BP	GO:0015743	malate transport	IEP	Neighborhood
BP	GO:0015849	organic acid transport	IEP	Neighborhood
MF	GO:0016301	kinase activity	IEP	Neighborhood
MF	GO:0016307	phosphatidylinositol phosphate kinase activity	IEP	Neighborhood
BP	GO:0032940	secretion by cell	IEP	Neighborhood
MF	GO:0043168	anion binding	IEP	Neighborhood
CC	GO:0044448	cell cortex part	IEP	Neighborhood
BP	GO:0046486	glycerolipid metabolic process	IEP	Neighborhood
BP	GO:0046488	phosphatidylinositol metabolic process	IEP	Neighborhood
BP	GO:0046903	secretion	IEP	Neighborhood
BP	GO:0046942	carboxylic acid transport	IEP	Neighborhood
BP	GO:0051179	localization	IEP	Neighborhood
BP	GO:0051234	establishment of localization	IEP	Neighborhood
BP	GO:0071702	organic substance transport	IEP	Neighborhood
CC	GO:0099023	tethering complex	IEP	Neighborhood

InterPro domains	Description	Start	Stop
IPR005150	Cellulose_synth	281	1029

External Links

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Solyc05g053560.4.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation