Solyc05g053660.3.1


Description : transcription factor (bHLH)


Gene families : OG0000509 (Archaeplastida) Phylogenetic Tree(s): OG0000509_tree ,
OG_05_0000283 (LandPlants) Phylogenetic Tree(s): OG_05_0000283_tree ,
OG_06_0009573 (SeedPlants) Phylogenetic Tree(s): OG_06_0009573_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g053660.3.1
Cluster HCCA: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00198780 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
AMTR_s00089p00043950 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.05 Archaeplastida
GSVIVT01000012001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 Archaeplastida
GSVIVT01003437001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01017892001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
GSVIVT01021074001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.03 Archaeplastida
Gb_17233 No alias transcription factor (bHLH) 0.02 Archaeplastida
Gb_21105 No alias transcription factor (bHLH) 0.04 Archaeplastida
Gb_34544 No alias no hits & (original description: none) 0.02 Archaeplastida
LOC_Os02g15760.1 No alias transcription factor (bHLH) 0.03 Archaeplastida
LOC_Os02g46560.1 No alias transcription factor (bHLH) 0.02 Archaeplastida
LOC_Os02g52190.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os08g37730.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os09g29360.1 No alias transcription factor (bHLH) 0.04 Archaeplastida
LOC_Os10g23050.1 No alias transcription factor (bHLH) 0.06 Archaeplastida
MA_120602g0010 No alias transcription factor (bHLH) 0.03 Archaeplastida
MA_141469g0010 No alias transcription factor (bHLH) 0.02 Archaeplastida
Pp3c22_14220V3.1 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Archaeplastida
Solyc01g098720.3.1 No alias transcription factor (bHLH) 0.07 Archaeplastida
Zm00001e000161_P002 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e015494_P002 No alias transcription factor (bHLH) 0.02 Archaeplastida
Zm00001e023271_P001 No alias transcription factor (bHLH) 0.03 Archaeplastida
Zm00001e026696_P001 No alias transcription factor (bHLH) 0.08 Archaeplastida
Zm00001e037075_P001 No alias transcription factor (bHLH) 0.04 Archaeplastida
Zm00001e041403_P001 No alias transcription factor (bHLH) 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0000295 adenine nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0005346 purine ribonucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0005347 ATP transmembrane transporter activity IEP Neighborhood
MF GO:0005471 ATP:ADP antiporter activity IEP Neighborhood
BP GO:0006862 nucleotide transport IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008514 organic anion transmembrane transporter activity IEP Neighborhood
BP GO:0009439 cyanate metabolic process IEP Neighborhood
MF GO:0015035 protein disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015036 disulfide oxidoreductase activity IEP Neighborhood
MF GO:0015215 nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015216 purine nucleotide transmembrane transporter activity IEP Neighborhood
MF GO:0015217 ADP transmembrane transporter activity IEP Neighborhood
MF GO:0015238 drug transmembrane transporter activity IEP Neighborhood
MF GO:0015301 anion:anion antiporter activity IEP Neighborhood
MF GO:0015605 organophosphate ester transmembrane transporter activity IEP Neighborhood
BP GO:0015748 organophosphate ester transport IEP Neighborhood
BP GO:0015931 nucleobase-containing compound transport IEP Neighborhood
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP Neighborhood
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0099516 ion antiporter activity IEP Neighborhood
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR011598 bHLH_dom 2 50
No external refs found!