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  5. Solyc05g053900.4.1

Solyc05g053900.4.1


Description : pepsin-type protease


Gene families : OG0000010 (Archaeplastida) Phylogenetic Tree(s): OG0000010_tree ,
OG_05_0001241 (LandPlants) Phylogenetic Tree(s): OG_05_0001241_tree ,
OG_06_0003215 (SeedPlants) Phylogenetic Tree(s): OG_06_0003215_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g053900.4.1
Cluster HCCA: Cluster_157

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00256490 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.04 Archaeplastida
AMTR_s00019p00061190 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.aspartic-type... 0.06 Archaeplastida
AT1G79720 No alias Eukaryotic aspartyl protease family protein 0.04 Archaeplastida
AT3G50050 No alias Eukaryotic aspartyl protease family protein 0.04 Archaeplastida
Cre01.g026500 No alias Protein degradation.peptidase families.aspartic-type... 0.01 Archaeplastida
GSVIVT01010876001 No alias Protein degradation.peptidase families.aspartic-type... 0.02 Archaeplastida
LOC_Os01g04710.1 No alias pepsin-type protease 0.02 Archaeplastida
LOC_Os01g41550.1 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os01g48750.1 No alias pepsin-type protease 0.04 Archaeplastida
LOC_Os04g58070.1 No alias pepsin-type protease 0.02 Archaeplastida
LOC_Os06g10670.1 No alias pepsin-type protease 0.03 Archaeplastida
LOC_Os11g08200.1 No alias pepsin-type protease 0.02 Archaeplastida
MA_255440g0010 No alias pepsin-type protease 0.03 Archaeplastida
MA_826663g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
Pp3c24_5970V3.1 No alias Eukaryotic aspartyl protease family protein 0.03 Archaeplastida
Smo418789 No alias Protein degradation.peptidase families.aspartic-type... 0.03 Archaeplastida
Solyc02g005601.1.1 No alias pepsin-type protease 0.03 Archaeplastida
Solyc08g074913.1.1 No alias pepsin-type protease 0.05 Archaeplastida
Zm00001e008989_P002 No alias pepsin-type protease 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003677 DNA binding IEP Neighborhood
MF GO:0003682 chromatin binding IEP Neighborhood
CC GO:0005634 nucleus IEP Neighborhood
BP GO:0006325 chromatin organization IEP Neighborhood
BP GO:0006479 protein methylation IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
BP GO:0008213 protein alkylation IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0008757 S-adenosylmethionine-dependent methyltransferase activity IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0016569 covalent chromatin modification IEP Neighborhood
BP GO:0016570 histone modification IEP Neighborhood
BP GO:0016571 histone methylation IEP Neighborhood
BP GO:0018022 peptidyl-lysine methylation IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
BP GO:0018193 peptidyl-amino acid modification IEP Neighborhood
BP GO:0018205 peptidyl-lysine modification IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0034968 histone lysine methylation IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
CC GO:0043226 organelle IEP Neighborhood
CC GO:0043227 membrane-bounded organelle IEP Neighborhood
CC GO:0043229 intracellular organelle IEP Neighborhood
CC GO:0043231 intracellular membrane-bounded organelle IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
InterPro domains Description Start Stop
IPR032799 TAXi_C 276 426
IPR032861 TAXi_N 75 257
No external refs found!