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  5. Solyc05g054020.3.1

Solyc05g054020.3.1


Description : Putative late blight resistance protein homolog R1B-16 OS=Solanum demissum (sp|q6l400|r1b16_solde : 107.0)


Gene families : OG0002833 (Archaeplastida) Phylogenetic Tree(s): OG0002833_tree ,
OG_05_0001906 (LandPlants) Phylogenetic Tree(s): OG_05_0001906_tree ,
OG_06_0001059 (SeedPlants) Phylogenetic Tree(s): OG_06_0001059_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g054020.3.1
Cluster HCCA: Cluster_167

Target Alias Description ECC score Gene Family Method Actions
Solyc04g008130.3.1 No alias Putative late blight resistance protein homolog R1A-6... 0.04 Archaeplastida
Solyc05g043420.2.1 No alias Putative late blight resistance protein homolog R1B-17... 0.1 Archaeplastida
Solyc05g044490.3.1 No alias Late blight resistance protein R1-A OS=Solanum demissum... 0.06 Archaeplastida
Solyc05g054010.4.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc06g064720.1.1 No alias Putative late blight resistance protein homolog R1B-12... 0.11 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEP Neighborhood
MF GO:0022803 passive transmembrane transporter activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!