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  5. Solyc05g054220.3.1

Solyc05g054220.3.1


Description : regulatory subunit beta of SNF1-related SnRK1 kinase complex. regulatory subunit beta of SnRK1 kinase complex


Gene families : OG0000952 (Archaeplastida) Phylogenetic Tree(s): OG0000952_tree ,
OG_05_0001859 (LandPlants) Phylogenetic Tree(s): OG_05_0001859_tree ,
OG_06_0002296 (SeedPlants) Phylogenetic Tree(s): OG_06_0002296_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g054220.3.1
Cluster HCCA: Cluster_250

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00095p00088300 evm_27.TU.AmTr_v1... Multi-process regulation.SnRK1 metabolic regulator... 0.04 Archaeplastida
Cpa|evm.model.tig00020660.17 No alias No description available 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0004650 polygalacturonase activity IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
MF GO:0045300 acyl-[acyl-carrier-protein] desaturase activity IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006828 ASC_dom 211 281
IPR032640 AMPK1_CBM 98 178
No external refs found!