Solyc05g054370.2.1


Description : monofunctionial hydroxyacyl-CoA dehydrogenase


Gene families : OG0004413 (Archaeplastida) Phylogenetic Tree(s): OG0004413_tree ,
OG_05_0005834 (LandPlants) Phylogenetic Tree(s): OG_05_0005834_tree ,
OG_06_0007249 (SeedPlants) Phylogenetic Tree(s): OG_06_0007249_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g054370.2.1
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT3G06810 IBR3 acyl-CoA dehydrogenase-related 0.02 Archaeplastida
Solyc01g066310.4.1 No alias monofunctionial hydroxyacyl-CoA dehydrogenase 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Neighborhood
BP GO:0006887 exocytosis IEP Neighborhood
BP GO:0032940 secretion by cell IEP Neighborhood
CC GO:0044448 cell cortex part IEP Neighborhood
BP GO:0046903 secretion IEP Neighborhood
CC GO:0099023 tethering complex IEP Neighborhood
InterPro domains Description Start Stop
IPR002575 Aminoglycoside_PTrfase 43 275
IPR013786 AcylCoA_DH/ox_N 411 555
IPR006091 Acyl-CoA_Oxase/DH_cen-dom 560 661
IPR009075 AcylCo_DH/oxidase_C 673 822
No external refs found!