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  5. Solyc05g054480.3.1

Solyc05g054480.3.1


Description : actin filament protein


Gene families : OG0000334 (Archaeplastida) Phylogenetic Tree(s): OG0000334_tree ,
OG_05_0000214 (LandPlants) Phylogenetic Tree(s): OG_05_0000214_tree ,
OG_06_0000153 (SeedPlants) Phylogenetic Tree(s): OG_06_0000153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g054480.3.1
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00062p00184900 evm_27.TU.AmTr_v1... Cytoskeleton.microfilament network.actin filament protein 0.05 Archaeplastida
AT2G37620 AAc1, ACT1 actin 1 0.05 Archaeplastida
AT3G46520 ACT12 actin-12 0.05 Archaeplastida
AT3G53750 ACT3 actin 3 0.04 Archaeplastida
AT5G09810 ACT7 actin 7 0.04 Archaeplastida
AT5G59370 ACT4 actin 4 0.09 Archaeplastida
Cre03.g176833 No alias Cytoskeleton.microfilament network.actin filament protein 0.01 Archaeplastida
Cre13.g603700 No alias Cytoskeleton.microfilament network.actin filament protein 0.05 Archaeplastida
LOC_Os03g61970.1 No alias actin filament protein 0.03 Archaeplastida
LOC_Os10g36650.1 No alias actin filament protein 0.03 Archaeplastida
LOC_Os12g44350.1 No alias actin filament protein 0.07 Archaeplastida
MA_135063g0010 No alias actin filament protein 0.02 Archaeplastida
MA_1964g0010 No alias actin filament protein 0.02 Archaeplastida
Mp6g10990.1 No alias actin filament protein 0.03 Archaeplastida
Mp6g11010.1 No alias actin filament protein 0.04 Archaeplastida
Smo230187 No alias Cytoskeleton.microfilament network.actin filament protein 0.03 Archaeplastida
Zm00001e005489_P002 No alias actin filament protein 0.07 Archaeplastida
Zm00001e006282_P001 No alias actin filament protein 0.02 Archaeplastida
Zm00001e009080_P001 No alias actin filament protein 0.07 Archaeplastida
Zm00001e012159_P001 No alias actin filament protein 0.03 Archaeplastida
Zm00001e029684_P001 No alias actin filament protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP Neighborhood
MF GO:0004427 inorganic diphosphatase activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005509 calcium ion binding IEP Neighborhood
CC GO:0005575 cellular_component IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006644 phospholipid metabolic process IEP Neighborhood
BP GO:0006650 glycerophospholipid metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006813 potassium ion transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
MF GO:0015079 potassium ion transmembrane transporter activity IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0046486 glycerolipid metabolic process IEP Neighborhood
BP GO:0046488 phosphatidylinositol metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0071804 cellular potassium ion transport IEP Neighborhood
BP GO:0071805 potassium ion transmembrane transport IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!