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  5. Solyc05g055010.4.1

Solyc05g055010.4.1


Description : no hits & (original description: none)


Gene families : OG0004452 (Archaeplastida) Phylogenetic Tree(s): OG0004452_tree ,
OG_05_0004636 (LandPlants) Phylogenetic Tree(s): OG_05_0004636_tree ,
OG_06_0004124 (SeedPlants) Phylogenetic Tree(s): OG_06_0004124_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055010.4.1
Cluster HCCA: Cluster_124

Target Alias Description ECC score Gene Family Method Actions
Cpa|evm.model.tig00000403.5 No alias No description available 0.01 Archaeplastida
GSVIVT01023509001 No alias No description available 0.11 Archaeplastida
LOC_Os02g40900.1 No alias no hits & (original description: none) 0.14 Archaeplastida
Pp3c23_14650V3.1 No alias RNA-binding (RRM/RBD/RNP motifs) family protein 0.03 Archaeplastida
Zm00001e023018_P002 No alias no hits & (original description: none) 0.14 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003682 chromatin binding IEP Neighborhood
MF GO:0005515 protein binding IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008170 N-methyltransferase activity IEP Neighborhood
MF GO:0008276 protein methyltransferase activity IEP Neighborhood
MF GO:0010011 auxin binding IEP Neighborhood
MF GO:0016278 lysine N-methyltransferase activity IEP Neighborhood
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
MF GO:0042054 histone methyltransferase activity IEP Neighborhood
MF GO:0042562 hormone binding IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000504 RRM_dom 122 191
No external refs found!