Solyc05g055080.2.1


Description : no hits & (original description: none)


Gene families : OG0012852 (Archaeplastida) Phylogenetic Tree(s): OG0012852_tree ,
OG_05_0012781 (LandPlants) Phylogenetic Tree(s): OG_05_0012781_tree ,
OG_06_0012763 (SeedPlants) Phylogenetic Tree(s): OG_06_0012763_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055080.2.1
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00261470 evm_27.TU.AmTr_v1... No description available 0.1 Archaeplastida
Solyc11g006240.2.1 No alias no hits & (original description: none) 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
MF GO:0005516 calmodulin binding IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
MF GO:0008883 glutamyl-tRNA reductase activity IEP Neighborhood
BP GO:0016567 protein ubiquitination IEP Neighborhood
MF GO:0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
BP GO:0032446 protein modification by small protein conjugation IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033014 tetrapyrrole biosynthetic process IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0061630 ubiquitin protein ligase activity IEP Neighborhood
MF GO:0061659 ubiquitin-like protein ligase activity IEP Neighborhood
BP GO:0070647 protein modification by small protein conjugation or removal IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
MF GO:0140110 transcription regulator activity IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!