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  5. Solyc05g055200.4.1

Solyc05g055200.4.1


Description : SMXL strigolactone signal transducer


Gene families : OG0001002 (Archaeplastida) Phylogenetic Tree(s): OG0001002_tree ,
OG_05_0000604 (LandPlants) Phylogenetic Tree(s): OG_05_0000604_tree ,
OG_06_0000858 (SeedPlants) Phylogenetic Tree(s): OG_06_0000858_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055200.4.1
Cluster HCCA: Cluster_92

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00252890 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.02 Archaeplastida
AMTR_s00030p00222340 evm_27.TU.AmTr_v1... Protein SMAX1-LIKE 3 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00030p00222400 evm_27.TU.AmTr_v1... Phytohormones.strigolactone.perception and signal... 0.03 Archaeplastida
AT3G52490 No alias Double Clp-N motif-containing P-loop nucleoside... 0.07 Archaeplastida
AT4G29920 No alias Double Clp-N motif-containing P-loop nucleoside... 0.03 Archaeplastida
GSVIVT01034648001 No alias Phytohormones.strigolactone.perception and signal... 0.06 Archaeplastida
Gb_09621 No alias SMXL strigolactone signal transducer 0.06 Archaeplastida
Gb_33499 No alias SMXL strigolactone signal transducer 0.05 Archaeplastida
LOC_Os02g33460.1 No alias SMXL strigolactone signal transducer 0.05 Archaeplastida
LOC_Os04g23220.1 No alias Protein SMAX1-LIKE 5 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os04g33980.1 No alias SMXL strigolactone signal transducer 0.05 Archaeplastida
LOC_Os11g05820.1 No alias SMXL strigolactone signal transducer 0.03 Archaeplastida
MA_15290g0010 No alias Protein SUPPRESSOR OF MAX2 1 OS=Arabidopsis thaliana... 0.05 Archaeplastida
MA_800170g0010 No alias Protein SMAX1-like OS=Oryza sativa subsp. japonica... 0.05 Archaeplastida
Pp3c15_16120V3.1 No alias Double Clp-N motif-containing P-loop nucleoside... 0.06 Archaeplastida
Solyc01g007260.3.1 No alias SMXL strigolactone signal transducer 0.05 Archaeplastida
Zm00001e008174_P001 No alias SMXL strigolactone signal transducer 0.03 Archaeplastida
Zm00001e008462_P001 No alias SMXL strigolactone signal transducer 0.03 Archaeplastida
Zm00001e014536_P001 No alias Protein SMAX1-LIKE 5 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Zm00001e014748_P001 No alias SMXL strigolactone signal transducer 0.03 Archaeplastida
Zm00001e020895_P001 No alias SMXL strigolactone signal transducer 0.03 Archaeplastida
Zm00001e024175_P002 No alias SMXL strigolactone signal transducer 0.07 Archaeplastida
Zm00001e040671_P002 No alias SMXL strigolactone signal transducer 0.04 Archaeplastida
Zm00001e040845_P001 No alias SMXL strigolactone signal transducer 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006486 protein glycosylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0017076 purine nucleotide binding IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
MF GO:0030554 adenyl nucleotide binding IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
MF GO:0032553 ribonucleotide binding IEP Neighborhood
MF GO:0032555 purine ribonucleotide binding IEP Neighborhood
MF GO:0032559 adenyl ribonucleotide binding IEP Neighborhood
MF GO:0036094 small molecule binding IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043168 anion binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0043413 macromolecule glycosylation IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044260 cellular macromolecule metabolic process IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0070085 glycosylation IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
MF GO:0097159 organic cyclic compound binding IEP Neighborhood
MF GO:0097367 carbohydrate derivative binding IEP Neighborhood
MF GO:1901265 nucleoside phosphate binding IEP Neighborhood
MF GO:1901363 heterocyclic compound binding IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR004176 Clp_N 122 166
IPR004176 Clp_N 22 50
No external refs found!