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  5. Solyc05g055330.3.1

Solyc05g055330.3.1


Description : subfamily ABCG transporter


Gene families : OG0000050 (Archaeplastida) Phylogenetic Tree(s): OG0000050_tree ,
OG_05_0000049 (LandPlants) Phylogenetic Tree(s): OG_05_0000049_tree ,
OG_06_0000052 (SeedPlants) Phylogenetic Tree(s): OG_06_0000052_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055330.3.1
Cluster HCCA: Cluster_160

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00224800 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.02 Archaeplastida
AMTR_s00013p00097650 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AMTR_s00122p00085720 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.07 Archaeplastida
AMTR_s00122p00120860 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.03 Archaeplastida
AT1G15210 ATPDR7, PDR7 pleiotropic drug resistance 7 0.06 Archaeplastida
AT1G66950 PDR11, ATPDR11 pleiotropic drug resistance 11 0.03 Archaeplastida
AT2G26910 PDR4, ATPDR4 pleiotropic drug resistance 4 0.08 Archaeplastida
AT2G37280 ATPDR5, PDR5 pleiotropic drug resistance 5 0.05 Archaeplastida
AT3G53480 PIS1, ABCG37,... pleiotropic drug resistance 9 0.04 Archaeplastida
AT4G15230 ATPDR2, PDR2 pleiotropic drug resistance 2 0.04 Archaeplastida
GSVIVT01015456001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01016993001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01016998001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
GSVIVT01017187001 No alias Solute transport.primary active transport.ABC... 0.04 Archaeplastida
GSVIVT01031378001 No alias Solute transport.primary active transport.ABC... 0.05 Archaeplastida
GSVIVT01035715001 No alias Solute transport.primary active transport.ABC... 0.03 Archaeplastida
Gb_17948 No alias no hits & (original description: none) 0.03 Archaeplastida
Gb_34309 No alias subfamily ABCG transporter 0.03 Archaeplastida
Gb_34645 No alias subfamily ABCG transporter 0.07 Archaeplastida
LOC_Os01g08260.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
LOC_Os01g42370.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os01g42410.1 No alias subfamily ABCG transporter 0.06 Archaeplastida
LOC_Os02g11760.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
LOC_Os02g32690.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os06g36090.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os08g29570.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
LOC_Os09g16330.2 No alias subfamily ABCG transporter 0.04 Archaeplastida
LOC_Os09g16449.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
LOC_Os12g13720.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_10426781g0010 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_10427683g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_10429185g0020 No alias ABC transporter G family member 35 OS=Arabidopsis... 0.04 Archaeplastida
MA_108793g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
MA_117094g0010 No alias no description available(sp|h6ws94|pdr1_pethy : 134.0) 0.03 Archaeplastida
MA_12781g0010 No alias ABC transporter G family member 31 OS=Oryza sativa... 0.02 Archaeplastida
MA_160238g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_18770g0010 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_598099g0010 No alias subfamily ABCG transporter 0.04 Archaeplastida
MA_949447g0010 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp1g24380.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Mp2g07030.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp2g21800.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp4g05490.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Mp4g06670.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp8g09300.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Mp8g13070.1 No alias subfamily ABCG transporter 0.02 Archaeplastida
Pp3c19_18700V3.1 No alias pleiotropic drug resistance 7 0.04 Archaeplastida
Pp3c22_9340V3.1 No alias pleiotropic drug resistance 12 0.03 Archaeplastida
Pp3c5_3240V3.1 No alias ABC-2 and Plant PDR ABC-type transporter family protein 0.05 Archaeplastida
Smo115821 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Smo429390 No alias Solute transport.primary active transport.ABC... 0.02 Archaeplastida
Solyc05g053610.2.1 No alias subfamily ABCG transporter 0.05 Archaeplastida
Solyc06g076930.2.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Solyc08g067610.3.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Solyc08g067620.2.1 No alias subfamily ABCG transporter 0.03 Archaeplastida
Solyc09g091660.3.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Solyc09g091670.3.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Solyc12g019620.2.1 No alias subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e006460_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e016714_P002 No alias cuticular lipid exporter (PEC1). subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e020667_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e024257_P001 No alias subfamily ABCG transporter 0.03 Archaeplastida
Zm00001e026148_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida
Zm00001e040575_P001 No alias subfamily ABCG transporter 0.04 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATPase activity IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0003333 amino acid transmembrane transport IEP Neighborhood
MF GO:0003997 acyl-CoA oxidase activity IEP Neighborhood
MF GO:0004435 phosphatidylinositol phospholipase C activity IEP Neighborhood
MF GO:0004620 phospholipase activity IEP Neighborhood
MF GO:0004629 phospholipase C activity IEP Neighborhood
CC GO:0005777 peroxisome IEP Neighborhood
BP GO:0006082 organic acid metabolic process IEP Neighborhood
BP GO:0006629 lipid metabolic process IEP Neighborhood
BP GO:0006631 fatty acid metabolic process IEP Neighborhood
BP GO:0006633 fatty acid biosynthetic process IEP Neighborhood
BP GO:0006635 fatty acid beta-oxidation IEP Neighborhood
BP GO:0006865 amino acid transport IEP Neighborhood
BP GO:0007165 signal transduction IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
BP GO:0008610 lipid biosynthetic process IEP Neighborhood
BP GO:0009062 fatty acid catabolic process IEP Neighborhood
BP GO:0009308 amine metabolic process IEP Neighborhood
BP GO:0009690 cytokinin metabolic process IEP Neighborhood
BP GO:0009987 cellular process IEP Neighborhood
BP GO:0010817 regulation of hormone levels IEP Neighborhood
BP GO:0015711 organic anion transport IEP Neighborhood
BP GO:0015849 organic acid transport IEP Neighborhood
BP GO:0016042 lipid catabolic process IEP Neighborhood
BP GO:0016053 organic acid biosynthetic process IEP Neighborhood
BP GO:0016054 organic acid catabolic process IEP Neighborhood
MF GO:0016298 lipase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016634 oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016746 transferase activity, transferring acyl groups IEP Neighborhood
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Neighborhood
MF GO:0019139 cytokinin dehydrogenase activity IEP Neighborhood
BP GO:0019395 fatty acid oxidation IEP Neighborhood
BP GO:0019752 carboxylic acid metabolic process IEP Neighborhood
BP GO:0030258 lipid modification IEP Neighborhood
BP GO:0032787 monocarboxylic acid metabolic process IEP Neighborhood
BP GO:0034440 lipid oxidation IEP Neighborhood
BP GO:0034754 cellular hormone metabolic process IEP Neighborhood
BP GO:0042445 hormone metabolic process IEP Neighborhood
CC GO:0042579 microbody IEP Neighborhood
BP GO:0043436 oxoacid metabolic process IEP Neighborhood
MF GO:0043531 ADP binding IEP Neighborhood
BP GO:0044237 cellular metabolic process IEP Neighborhood
BP GO:0044238 primary metabolic process IEP Neighborhood
BP GO:0044242 cellular lipid catabolic process IEP Neighborhood
BP GO:0044255 cellular lipid metabolic process IEP Neighborhood
BP GO:0044281 small molecule metabolic process IEP Neighborhood
BP GO:0044282 small molecule catabolic process IEP Neighborhood
BP GO:0044283 small molecule biosynthetic process IEP Neighborhood
BP GO:0046394 carboxylic acid biosynthetic process IEP Neighborhood
BP GO:0046395 carboxylic acid catabolic process IEP Neighborhood
BP GO:0046942 carboxylic acid transport IEP Neighborhood
BP GO:0071704 organic substance metabolic process IEP Neighborhood
BP GO:0072329 monocarboxylic acid catabolic process IEP Neighborhood
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Neighborhood
BP GO:0098656 anion transmembrane transport IEP Neighborhood
BP GO:1903825 organic acid transmembrane transport IEP Neighborhood
BP GO:1905039 carboxylic acid transmembrane transport IEP Neighborhood
InterPro domains Description Start Stop
IPR013525 ABC_2_trans 1203 1413
IPR013525 ABC_2_trans 531 743
IPR013581 PDR_assoc 748 813
IPR003439 ABC_transporter-like 905 1057
IPR029481 ABC_trans_N 110 170
IPR003439 ABC_transporter-like 195 377
No external refs found!