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  5. Solyc05g055390.3.1

Solyc05g055390.3.1


Description : RING-H2-class E3 ligase


Gene families : OG0000004 (Archaeplastida) Phylogenetic Tree(s): No tree available for this family ,
OG_05_0003924 (LandPlants) Phylogenetic Tree(s): OG_05_0003924_tree ,
OG_06_0005596 (SeedPlants) Phylogenetic Tree(s): OG_06_0005596_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055390.3.1
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00229930 evm_27.TU.AmTr_v1... Protein degradation.peptide tagging.Ubiquitin... 0.02 Archaeplastida
AT1G49200 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G11360 RHA1B RING-H2 finger A1B 0.04 Archaeplastida
AT4G33565 No alias RING/U-box superfamily protein 0.04 Archaeplastida
AT4G40070 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Cre01.g009101 No alias No description available 0.03 Archaeplastida
GSVIVT01007975001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.04 Archaeplastida
Gb_14821 No alias RHA2 signal transducer of abscisic acid perception 0.05 Archaeplastida
LOC_Os02g14990.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os08g43670.1 No alias NEP1-interacting protein 2 OS=Arabidopsis thaliana... 0.02 Archaeplastida
LOC_Os09g36500.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os12g24490.1 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_17390g0010 No alias RING-H2-class E3 ligase 0.03 Archaeplastida
MA_222729g0010 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
MA_96368g0010 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Pp3c19_14050V3.1 No alias RING/U-box superfamily protein 0.03 Archaeplastida
Pp3c1_9560V3.1 No alias TOXICOS EN LEVADURA 2 0.04 Archaeplastida
Pp3c5_4170V3.1 No alias RING/U-box superfamily protein 0.02 Archaeplastida
Solyc12g087840.1.1 No alias RING-H2-class E3 ligase 0.04 Archaeplastida
Zm00001e007956_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida
Zm00001e041824_P001 No alias RING-H2-class E3 ligase 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001841 Znf_RING 86 129
No external refs found!