Description : pectate lyase
Gene families : OG0000134 (Archaeplastida) Phylogenetic Tree(s): OG0000134_tree ,
OG_05_0000111 (LandPlants) Phylogenetic Tree(s): OG_05_0000111_tree ,
OG_06_0000097 (SeedPlants) Phylogenetic Tree(s): OG_06_0000097_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | HRR: Solyc05g055510.3.1 | |
Cluster | HCCA: Cluster_46 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
AT5G48900 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
GSVIVT01003984001 | No alias | Cell wall.pectin.modification and degradation.pectate lyase | 0.03 | Archaeplastida | |
Gb_12278 | No alias | pectate lyase | 0.04 | Archaeplastida | |
MA_10205415g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_1164682g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_170547g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
MA_476625g0010 | No alias | no hits & (original description: none) | 0.02 | Archaeplastida | |
MA_91467g0010 | No alias | pectate lyase | 0.03 | Archaeplastida | |
Pp3c3_35190V3.1 | No alias | Pectin lyase-like superfamily protein | 0.02 | Archaeplastida | |
Solyc02g093580.4.1 | No alias | pectate lyase | 0.03 | Archaeplastida | |
Zm00001e004654_P002 | No alias | pectate lyase | 0.04 | Archaeplastida |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0005337 | nucleoside transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0015035 | protein disulfide oxidoreductase activity | IEP | Neighborhood |
MF | GO:0015036 | disulfide oxidoreductase activity | IEP | Neighborhood |
BP | GO:0015858 | nucleoside transport | IEP | Neighborhood |
BP | GO:0015931 | nucleobase-containing compound transport | IEP | Neighborhood |
MF | GO:0015932 | nucleobase-containing compound transmembrane transporter activity | IEP | Neighborhood |
MF | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | IEP | Neighborhood |
BP | GO:1901264 | carbohydrate derivative transport | IEP | Neighborhood |
MF | GO:1901505 | carbohydrate derivative transmembrane transporter activity | IEP | Neighborhood |
BP | GO:1901642 | nucleoside transmembrane transport | IEP | Neighborhood |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR002022 | Pec_lyase | 153 | 337 |
No external refs found! |