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  5. Solyc05g055960.1.1

Solyc05g055960.1.1


Description : no hits & (original description: none)


Gene families : OG0000783 (Archaeplastida) Phylogenetic Tree(s): OG0000783_tree ,
OG_05_0001600 (LandPlants) Phylogenetic Tree(s): OG_05_0001600_tree ,
OG_06_0011511 (SeedPlants) Phylogenetic Tree(s): OG_06_0011511_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055960.1.1
Cluster HCCA: Cluster_55

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00149p00090220 evm_27.TU.AmTr_v1... No description available 0.06 Archaeplastida
GSVIVT01010731001 No alias Ankyrin repeat-containing protein At5g02620... 0.11 Archaeplastida
GSVIVT01013543001 No alias No description available 0.07 Archaeplastida
GSVIVT01027206001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_08870 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.03 Archaeplastida
Gb_35378 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os11g15460.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc07g061760.3.1 No alias Ankyrin repeat-containing protein At5g02620... 0.05 Archaeplastida
Zm00001e012087_P001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana... 0.09 Archaeplastida
Zm00001e024554_P002 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006355 regulation of transcription, DNA-templated IEP Neighborhood
BP GO:0009889 regulation of biosynthetic process IEP Neighborhood
BP GO:0010468 regulation of gene expression IEP Neighborhood
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Neighborhood
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Neighborhood
BP GO:0019222 regulation of metabolic process IEP Neighborhood
BP GO:0031323 regulation of cellular metabolic process IEP Neighborhood
BP GO:0031326 regulation of cellular biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Neighborhood
BP GO:0051252 regulation of RNA metabolic process IEP Neighborhood
BP GO:0060255 regulation of macromolecule metabolic process IEP Neighborhood
BP GO:0080090 regulation of primary metabolic process IEP Neighborhood
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Neighborhood
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Neighborhood
BP GO:2001141 regulation of RNA biosynthetic process IEP Neighborhood
InterPro domains Description Start Stop
IPR026961 PGG_dom 13 130
No external refs found!