1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g055970.4.1

Solyc05g055970.4.1


Description : no hits & (original description: none)


Gene families : OG0000783 (Archaeplastida) Phylogenetic Tree(s): OG0000783_tree ,
OG_05_0001600 (LandPlants) Phylogenetic Tree(s): OG_05_0001600_tree ,
OG_06_0001659 (SeedPlants) Phylogenetic Tree(s): OG_06_0001659_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g055970.4.1
Cluster HCCA: Cluster_183

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01001633001 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis thaliana 0.04 Archaeplastida
GSVIVT01001639001 No alias No description available 0.04 Archaeplastida
GSVIVT01001645001 No alias No description available 0.04 Archaeplastida
GSVIVT01013586001 No alias No description available 0.02 Archaeplastida
GSVIVT01013591001 No alias Protein ACCELERATED CELL DEATH 6 OS=Arabidopsis thaliana 0.01 Archaeplastida
GSVIVT01020895001 No alias Ankyrin repeat-containing protein At5g02620... 0.01 Archaeplastida
Gb_09218 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_26468 No alias Ankyrin repeat-containing protein At5g02620... 0.01 Archaeplastida
Gb_26479 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.03 Archaeplastida
Gb_26482 No alias Ankyrin repeat-containing protein ITN1 OS=Arabidopsis... 0.02 Archaeplastida
LOC_Os11g14570.1 No alias Ankyrin repeat-containing protein NPR4 OS=Oryza sativa... 0.05 Archaeplastida
LOC_Os11g14630.1 No alias Ankyrin repeat-containing protein At2g01680... 0.03 Archaeplastida
LOC_Os11g15460.1 No alias no hits & (original description: none) 0.05 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
BP GO:0000041 transition metal ion transport IEP Neighborhood
MF GO:0001871 pattern binding IEP Neighborhood
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0004611 phosphoenolpyruvate carboxykinase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
MF GO:0005375 copper ion transmembrane transporter activity IEP Neighborhood
BP GO:0006099 tricarboxylic acid cycle IEP Neighborhood
BP GO:0006101 citrate metabolic process IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006807 nitrogen compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006820 anion transport IEP Neighborhood
BP GO:0006825 copper ion transport IEP Neighborhood
BP GO:0008037 cell recognition IEP Neighborhood
MF GO:0008131 primary amine oxidase activity IEP Neighborhood
BP GO:0008150 biological_process IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
MF GO:0008509 anion transmembrane transporter activity IEP Neighborhood
MF GO:0008964 phosphoenolpyruvate carboxylase activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009606 tropism IEP Neighborhood
BP GO:0010274 hydrotropism IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015103 inorganic anion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015698 inorganic anion transport IEP Neighborhood
BP GO:0015977 carbon fixation IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Neighborhood
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
BP GO:0016999 antibiotic metabolic process IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0019538 protein metabolic process IEP Neighborhood
BP GO:0022414 reproductive process IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030001 metal ion transport IEP Neighborhood
MF GO:0030246 carbohydrate binding IEP Neighborhood
MF GO:0030247 polysaccharide binding IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
BP GO:0035434 copper ion transmembrane transport IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046873 metal ion transmembrane transporter activity IEP Neighborhood
BP GO:0048544 recognition of pollen IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0055085 transmembrane transport IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0072350 tricarboxylic acid metabolic process IEP Neighborhood
MF GO:0140096 catalytic activity, acting on a protein IEP Neighborhood
BP GO:1901564 organonitrogen compound metabolic process IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR026961 PGG_dom 195 319
IPR026961 PGG_dom 4 120
No external refs found!