1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g056160.3.1

Solyc05g056160.3.1


Description : component beta type-5 of 26S proteasome


Gene families : OG0003488 (Archaeplastida) Phylogenetic Tree(s): OG0003488_tree ,
OG_05_0003854 (LandPlants) Phylogenetic Tree(s): OG_05_0003854_tree ,
OG_06_0003691 (SeedPlants) Phylogenetic Tree(s): OG_06_0003691_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g056160.3.1
Cluster HCCA: Cluster_220

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00078p00083100 evm_27.TU.AmTr_v1... Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
AT1G13060 PBE1 20S proteasome beta subunit E1 0.07 Archaeplastida
Cpa|evm.model.tig00020554.44 No alias Protein degradation.26S proteasome.20S core... 0.05 Archaeplastida
Cre10.g461950 No alias Protein degradation.26S proteasome.20S core... 0.14 Archaeplastida
GSVIVT01010375001 No alias Protein degradation.26S proteasome.20S core... 0.04 Archaeplastida
LOC_Os06g06030.1 No alias component beta type-5 of 26S proteasome 0.12 Archaeplastida
MA_2177g0010 No alias component beta type-5 of 26S proteasome 0.08 Archaeplastida
Mp2g06230.1 No alias component beta type-5 of 26S proteasome 0.14 Archaeplastida
Pp3c11_2970V3.1 No alias N-terminal nucleophile aminohydrolases (Ntn hydrolases)... 0.07 Archaeplastida
Smo270977 No alias Protein degradation.26S proteasome.20S core... 0.03 Archaeplastida
Zm00001e036472_P001 No alias component beta type-5 of 26S proteasome 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004298 threonine-type endopeptidase activity IEA Interproscan
CC GO:0005839 proteasome core complex IEA Interproscan
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
CC GO:0000814 ESCRT II complex IEP Neighborhood
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Neighborhood
BP GO:0006605 protein targeting IEP Neighborhood
BP GO:0006612 protein targeting to membrane IEP Neighborhood
BP GO:0006613 cotranslational protein targeting to membrane IEP Neighborhood
BP GO:0006614 SRP-dependent cotranslational protein targeting to membrane IEP Neighborhood
MF GO:0008312 7S RNA binding IEP Neighborhood
BP GO:0009056 catabolic process IEP Neighborhood
BP GO:0009057 macromolecule catabolic process IEP Neighborhood
BP GO:0019725 cellular homeostasis IEP Neighborhood
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP Neighborhood
BP GO:0019941 modification-dependent protein catabolic process IEP Neighborhood
BP GO:0033365 protein localization to organelle IEP Neighborhood
BP GO:0034613 cellular protein localization IEP Neighborhood
CC GO:0036452 ESCRT complex IEP Neighborhood
BP GO:0042592 homeostatic process IEP Neighborhood
BP GO:0043248 proteasome assembly IEP Neighborhood
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Neighborhood
BP GO:0044248 cellular catabolic process IEP Neighborhood
BP GO:0044265 cellular macromolecule catabolic process IEP Neighborhood
CC GO:0044432 endoplasmic reticulum part IEP Neighborhood
CC GO:0044433 cytoplasmic vesicle part IEP Neighborhood
CC GO:0044440 endosomal part IEP Neighborhood
CC GO:0044444 cytoplasmic part IEP Neighborhood
BP GO:0045047 protein targeting to ER IEP Neighborhood
BP GO:0045454 cell redox homeostasis IEP Neighborhood
CC GO:0048500 signal recognition particle IEP Neighborhood
BP GO:0070727 cellular macromolecule localization IEP Neighborhood
BP GO:0070972 protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0071985 multivesicular body sorting pathway IEP Neighborhood
CC GO:0072546 ER membrane protein complex IEP Neighborhood
BP GO:0072594 establishment of protein localization to organelle IEP Neighborhood
BP GO:0072599 establishment of protein localization to endoplasmic reticulum IEP Neighborhood
BP GO:0072657 protein localization to membrane IEP Neighborhood
BP GO:0090150 establishment of protein localization to membrane IEP Neighborhood
CC GO:0098796 membrane protein complex IEP Neighborhood
BP GO:1901575 organic substance catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR001353 Proteasome_sua/b 55 235
No external refs found!