1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc05g056440.3.1

Solyc05g056440.3.1


Description : no hits & (original description: none)


Gene families : OG0000015 (Archaeplastida) Phylogenetic Tree(s): OG0000015_tree ,
OG_05_0000013 (LandPlants) Phylogenetic Tree(s): OG_05_0000013_tree ,
OG_06_0000212 (SeedPlants) Phylogenetic Tree(s): OG_06_0000212_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g056440.3.1
Cluster HCCA: Cluster_7

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00251850 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana 0.02 Archaeplastida
AMTR_s00017p00021670 evm_27.TU.AmTr_v1... Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana 0.04 Archaeplastida
AMTR_s00131p00053580 evm_27.TU.AmTr_v1... Auxin-induced protein 6B OS=Glycine max 0.03 Archaeplastida
AT1G17345 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT2G45210 No alias SAUR-like auxin-responsive protein family 0.05 Archaeplastida
AT3G12955 No alias SAUR-like auxin-responsive protein family 0.06 Archaeplastida
AT3G60690 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT4G34790 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
AT5G10990 No alias SAUR-like auxin-responsive protein family 0.05 Archaeplastida
AT5G20820 No alias SAUR-like auxin-responsive protein family 0.04 Archaeplastida
AT5G66260 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
GSVIVT01000929001 No alias No description available 0.03 Archaeplastida
GSVIVT01015023001 No alias No description available 0.03 Archaeplastida
GSVIVT01024127001 No alias Auxin-induced protein 15A OS=Glycine max 0.05 Archaeplastida
GSVIVT01024130001 No alias Auxin-induced protein 10A5 OS=Glycine max 0.05 Archaeplastida
GSVIVT01024134001 No alias Auxin-induced protein 15A OS=Glycine max 0.04 Archaeplastida
GSVIVT01024135001 No alias Auxin-responsive protein SAUR20 OS=Arabidopsis thaliana 0.03 Archaeplastida
GSVIVT01024136001 No alias Auxin-induced protein 15A OS=Glycine max 0.02 Archaeplastida
GSVIVT01038622001 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana 0.03 Archaeplastida
Gb_02943 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
Gb_16165 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_31882 No alias no hits & (original description: none) 0.02 Archaeplastida
Gb_39704 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os01g70050.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g05060.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os02g24700.1 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.04 Archaeplastida
LOC_Os02g42990.1 No alias Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os02g52990.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os04g56680.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os04g56690.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os06g48860.1 No alias no hits & (original description: none) 0.04 Archaeplastida
LOC_Os08g02520.1 No alias Auxin-induced protein X15 OS=Glycine max... 0.02 Archaeplastida
LOC_Os08g35110.1 No alias no description available(sp|q29pu2|sau76_arath : 85.5) 0.02 Archaeplastida
LOC_Os09g26610.1 No alias no hits & (original description: none) 0.03 Archaeplastida
LOC_Os10g36703.1 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.03 Archaeplastida
LOC_Os12g41600.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_10205229g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10386g0020 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.03 Archaeplastida
MA_10430311g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_16043g0010 No alias Auxin-responsive protein SAUR50 OS=Arabidopsis thaliana... 0.04 Archaeplastida
MA_16245g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_43064g0010 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_5864g0010 No alias Auxin-responsive protein SAUR32 OS=Arabidopsis thaliana... 0.02 Archaeplastida
MA_667011g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_85990g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c13_18960V3.1 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
Pp3c25_12110V3.1 No alias SAUR-like auxin-responsive protein family 0.03 Archaeplastida
Pp3c3_6860V3.1 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
Pp3c5_24610V3.1 No alias SAUR-like auxin-responsive protein family 0.02 Archaeplastida
Solyc01g110800.3.1 No alias Auxin-induced protein 15A OS=Glycine max... 0.03 Archaeplastida
Solyc05g025985.1.1 No alias no description available(sp|q29pu2|sau76_arath : 90.9) 0.07 Archaeplastida
Solyc07g042470.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Solyc08g079150.1.1 No alias Auxin-responsive protein SAUR36 OS=Arabidopsis thaliana... 0.02 Archaeplastida
Zm00001e009870_P001 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023494_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e030223_P001 No alias no hits & (original description: none) 0.02 Archaeplastida
Zm00001e036561_P001 No alias Auxin-responsive protein SAUR50 OS=Helianthus annuus... 0.02 Archaeplastida

Type GO Term Name Evidence Source
BP GO:0009733 response to auxin IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004175 endopeptidase activity IEP Neighborhood
MF GO:0004252 serine-type endopeptidase activity IEP Neighborhood
MF GO:0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity IEP Neighborhood
BP GO:0005975 carbohydrate metabolic process IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0008152 metabolic process IEP Neighborhood
MF GO:0008233 peptidase activity IEP Neighborhood
MF GO:0008236 serine-type peptidase activity IEP Neighborhood
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP Neighborhood
MF GO:0016645 oxidoreductase activity, acting on the CH-NH group of donors IEP Neighborhood
MF GO:0016646 oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor IEP Neighborhood
MF GO:0016759 cellulose synthase activity IEP Neighborhood
MF GO:0016760 cellulose synthase (UDP-forming) activity IEP Neighborhood
MF GO:0016787 hydrolase activity IEP Neighborhood
MF GO:0017171 serine hydrolase activity IEP Neighborhood
BP GO:0030243 cellulose metabolic process IEP Neighborhood
BP GO:0030244 cellulose biosynthetic process IEP Neighborhood
BP GO:0050789 regulation of biological process IEP Neighborhood
BP GO:0050794 regulation of cellular process IEP Neighborhood
BP GO:0065007 biological regulation IEP Neighborhood
MF GO:0070011 peptidase activity, acting on L-amino acid peptides IEP Neighborhood
InterPro domains Description Start Stop
IPR003676 SAUR_fam 4 70
No external refs found!