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  5. Solyc05g056500.1.1

Solyc05g056500.1.1


Description : U-box domain-containing protein 26 OS=Arabidopsis thaliana (sp|q9fxa4|pub26_arath : 139.0)


Gene families : OG0000112 (Archaeplastida) Phylogenetic Tree(s): OG0000112_tree ,
OG_05_0012819 (LandPlants) Phylogenetic Tree(s): OG_05_0012819_tree ,
OG_06_0012815 (SeedPlants) Phylogenetic Tree(s): OG_06_0012815_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g056500.1.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00257160 evm_27.TU.AmTr_v1... U-box domain-containing protein 25 OS=Arabidopsis thaliana 0.02 Archaeplastida
Gb_02635 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 Archaeplastida
Gb_29938 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
LOC_Os02g33680.1 No alias U-box domain-containing protein 29 OS=Arabidopsis... 0.05 Archaeplastida
LOC_Os02g34410.1 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.04 Archaeplastida
LOC_Os08g04470.1 No alias U-box domain-containing protein 8 OS=Arabidopsis... 0.02 Archaeplastida
MA_10425865g0010 No alias U-box domain-containing protein 25 OS=Arabidopsis... 0.07 Archaeplastida
MA_10432981g0010 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.04 Archaeplastida
MA_33190g0010 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.03 Archaeplastida
MA_481299g0010 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Smo416356 No alias U-box domain-containing protein 30 OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo426053 No alias U-box domain-containing protein 26 OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e014752_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e014766_P001 No alias E3 ubiquitin ligase (PUB) 0.03 Archaeplastida
Zm00001e036030_P001 No alias U-box domain-containing protein 21 OS=Arabidopsis... 0.02 Archaeplastida
Zm00001e038657_P001 No alias U-box domain-containing protein 75 OS=Oryza sativa... 0.04 Archaeplastida
Zm00001e039417_P001 No alias E3 ubiquitin-protein ligase PUB23 OS=Arabidopsis... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004842 ubiquitin-protein transferase activity IEA Interproscan
BP GO:0016567 protein ubiquitination IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEP Neighborhood
InterPro domains Description Start Stop
IPR003613 Ubox_domain 8 79
No external refs found!