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  5. Solyc05g150126.1.1

Solyc05g150126.1.1


Description : Retrovirus-related Pol polyprotein from transposon RE1 OS=Arabidopsis thaliana (sp|q94hw2|polr1_arath : 92.8)


Gene families : OG0000100 (Archaeplastida) Phylogenetic Tree(s): OG0000100_tree ,
OG_05_0000036 (LandPlants) Phylogenetic Tree(s): OG_05_0000036_tree ,
OG_06_0000011 (SeedPlants) Phylogenetic Tree(s): OG_06_0000011_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc05g150126.1.1
Cluster HCCA: Cluster_16

Target Alias Description ECC score Gene Family Method Actions
Solyc01g057523.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.03 Archaeplastida
Solyc01g058685.1.1 No alias no hits & (original description: none) 0.01 Archaeplastida
Solyc03g033755.1.1 No alias no hits & (original description: none) 0.02 Archaeplastida
Solyc03g059207.1.1 No alias No annotation 0.09 Archaeplastida
Solyc03g077985.1.1 No alias No annotation 0.07 Archaeplastida
Solyc03g093777.1.1 No alias No annotation 0.14 Archaeplastida
Solyc04g050573.1.1 No alias no hits & (original description: none) 0.2 Archaeplastida
Solyc04g056727.1.1 No alias no hits & (original description: none) 0.25 Archaeplastida
Solyc05g026607.1.1 No alias No annotation 0.02 Archaeplastida
Solyc07g025095.1.1 No alias No annotation 0.08 Archaeplastida
Solyc07g039455.1.1 No alias No annotation 0.04 Archaeplastida
Solyc07g040905.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.01 Archaeplastida
Solyc07g061865.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g014455.1.1 No alias No annotation 0.07 Archaeplastida
Solyc08g042065.1.1 No alias No annotation 0.01 Archaeplastida
Solyc08g043143.1.1 No alias No annotation 0.06 Archaeplastida
Solyc08g066485.1.1 No alias No annotation 0.14 Archaeplastida
Solyc09g059748.1.1 No alias no hits & (original description: none) 0.03 Archaeplastida
Solyc10g024387.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.01 Archaeplastida
Solyc11g010815.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.17 Archaeplastida
Solyc11g020847.1.1 No alias No annotation 0.01 Archaeplastida
Solyc11g032065.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.17 Archaeplastida
Solyc11g045338.1.1 No alias Uncharacterized mitochondrial protein AtMg00810... 0.04 Archaeplastida
Solyc12g036475.1.1 No alias No annotation 0.02 Archaeplastida
Solyc12g040817.1.1 No alias Retrovirus-related Pol polyprotein from transposon RE1... 0.01 Archaeplastida
Solyc12g042565.1.1 No alias No annotation 0.17 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!