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  5. Solyc06g005180.1.1

Solyc06g005180.1.1


Description : C2H2 zinc finger transcription factor


Gene families : OG0000103 (Archaeplastida) Phylogenetic Tree(s): OG0000103_tree ,
OG_05_0000039 (LandPlants) Phylogenetic Tree(s): OG_05_0000039_tree ,
OG_06_0000340 (SeedPlants) Phylogenetic Tree(s): OG_06_0000340_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g005180.1.1
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
AT2G17180 No alias C2H2-like zinc finger protein 0.03 Archaeplastida
AT2G28710 No alias C2H2-type zinc finger family protein 0.04 Archaeplastida
AT5G04390 No alias C2H2-type zinc finger family protein 0.03 Archaeplastida
LOC_Os01g62190.1 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida
LOC_Os02g44120.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os03g32220.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os04g46670.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os05g38600.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
LOC_Os10g40660.1 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e002022_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e007312_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e011983_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e019350_P001 No alias C2H2 zinc finger transcription factor 0.01 Archaeplastida
Zm00001e023171_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e029605_P001 No alias C2H2 zinc finger transcription factor 0.02 Archaeplastida
Zm00001e030114_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e038054_P001 No alias C2H2 zinc finger transcription factor 0.03 Archaeplastida
Zm00001e041518_P001 No alias C2H2 zinc finger transcription factor 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0003006 developmental process involved in reproduction IEP Neighborhood
MF GO:0004356 glutamate-ammonia ligase activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006508 proteolysis IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
BP GO:0006542 glutamine biosynthetic process IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Neighborhood
BP GO:0009790 embryo development IEP Neighborhood
BP GO:0009793 embryo development ending in seed dormancy IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015399 primary active transmembrane transporter activity IEP Neighborhood
MF GO:0015405 P-P-bond-hydrolysis-driven transmembrane transporter activity IEP Neighborhood
BP GO:0015672 monovalent inorganic cation transport IEP Neighborhood
MF GO:0016211 ammonia ligase activity IEP Neighborhood
CC GO:0016469 proton-transporting two-sector ATPase complex IEP Neighborhood
CC GO:0016471 vacuolar proton-transporting V-type ATPase complex IEP Neighborhood
MF GO:0016874 ligase activity IEP Neighborhood
MF GO:0016879 ligase activity, forming carbon-nitrogen bonds IEP Neighborhood
MF GO:0016880 acid-ammonia (or amide) ligase activity IEP Neighborhood
MF GO:0019829 cation-transporting ATPase activity IEP Neighborhood
MF GO:0022853 active ion transmembrane transporter activity IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
CC GO:0033176 proton-transporting V-type ATPase complex IEP Neighborhood
CC GO:0033178 proton-transporting two-sector ATPase complex, catalytic domain IEP Neighborhood
BP GO:0034220 ion transmembrane transport IEP Neighborhood
MF GO:0036442 proton-exporting ATPase activity IEP Neighborhood
MF GO:0042623 ATPase activity, coupled IEP Neighborhood
MF GO:0042625 ATPase coupled ion transmembrane transporter activity IEP Neighborhood
MF GO:0042626 ATPase activity, coupled to transmembrane movement of substances IEP Neighborhood
MF GO:0043492 ATPase activity, coupled to movement of substances IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
CC GO:0044437 vacuolar part IEP Neighborhood
MF GO:0044769 ATPase activity, coupled to transmembrane movement of ions, rotational mechanism IEP Neighborhood
MF GO:0045735 nutrient reservoir activity IEP Neighborhood
MF GO:0046961 proton-transporting ATPase activity, rotational mechanism IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0098655 cation transmembrane transport IEP Neighborhood
BP GO:0098660 inorganic ion transmembrane transport IEP Neighborhood
BP GO:0098662 inorganic cation transmembrane transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
BP GO:1902600 proton transmembrane transport IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!