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  5. Solyc06g005580.4.1

Solyc06g005580.4.1


Description : protease (RBL)


Gene families : OG0000617 (Archaeplastida) Phylogenetic Tree(s): OG0000617_tree ,
OG_05_0000454 (LandPlants) Phylogenetic Tree(s): OG_05_0000454_tree ,
OG_06_0000396 (SeedPlants) Phylogenetic Tree(s): OG_06_0000396_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g005580.4.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00069p00097470 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
AMTR_s00104p00044730 evm_27.TU.AmTr_v1... Protein degradation.peptidase families.serine-type... 0.16 Archaeplastida
AT1G52580 RBL5, ATRBL5 RHOMBOID-like protein 5 0.13 Archaeplastida
GSVIVT01017301001 No alias Protein degradation.peptidase families.serine-type... 0.14 Archaeplastida
GSVIVT01019824001 No alias Protein degradation.peptidase families.serine-type... 0.03 Archaeplastida
GSVIVT01034160001 No alias Protein degradation.peptidase families.serine-type... 0.04 Archaeplastida
LOC_Os01g05430.1 No alias protease (RBL) 0.02 Archaeplastida
LOC_Os03g02530.1 No alias protease (RBL) 0.02 Archaeplastida
LOC_Os04g48130.1 No alias protease (RBL) 0.03 Archaeplastida
LOC_Os08g43320.1 No alias protease (RBL) 0.03 Archaeplastida
LOC_Os10g37760.1 No alias protease (RBL) 0.05 Archaeplastida
Mp6g05540.1 No alias protease (RBL) 0.03 Archaeplastida
Pp3c17_14100V3.1 No alias RHOMBOID-like 1 0.03 Archaeplastida
Pp3c20_8630V3.1 No alias RHOMBOID-like protein 6 0.02 Archaeplastida
Pp3c23_15050V3.1 No alias RHOMBOID-like 1 0.03 Archaeplastida
Zm00001e002140_P002 No alias protease (RBL) 0.03 Archaeplastida
Zm00001e016920_P001 No alias protease (RBL) 0.03 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEA Interproscan
CC GO:0016021 integral component of membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity IEP Neighborhood
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005215 transporter activity IEP Neighborhood
BP GO:0006464 cellular protein modification process IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006793 phosphorus metabolic process IEP Neighborhood
BP GO:0006796 phosphate-containing compound metabolic process IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006811 ion transport IEP Neighborhood
BP GO:0006812 cation transport IEP Neighborhood
BP GO:0006950 response to stress IEP Neighborhood
BP GO:0006979 response to oxidative stress IEP Neighborhood
MF GO:0008081 phosphoric diester hydrolase activity IEP Neighborhood
BP GO:0008272 sulfate transport IEP Neighborhood
MF GO:0008324 cation transmembrane transporter activity IEP Neighborhood
BP GO:0010215 cellulose microfibril organization IEP Neighborhood
MF GO:0015075 ion transmembrane transporter activity IEP Neighborhood
MF GO:0015077 monovalent inorganic cation transmembrane transporter activity IEP Neighborhood
MF GO:0015078 proton transmembrane transporter activity IEP Neighborhood
MF GO:0015095 magnesium ion transmembrane transporter activity IEP Neighborhood
MF GO:0015116 sulfate transmembrane transporter activity IEP Neighborhood
MF GO:0015291 secondary active transmembrane transporter activity IEP Neighborhood
MF GO:0015297 antiporter activity IEP Neighborhood
MF GO:0015298 solute:cation antiporter activity IEP Neighborhood
MF GO:0015299 solute:proton antiporter activity IEP Neighborhood
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP Neighborhood
BP GO:0015693 magnesium ion transport IEP Neighborhood
MF GO:0016209 antioxidant activity IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Neighborhood
MF GO:0016740 transferase activity IEP Neighborhood
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0016837 carbon-oxygen lyase activity, acting on polysaccharides IEP Neighborhood
MF GO:0022857 transmembrane transporter activity IEP Neighborhood
MF GO:0022890 inorganic cation transmembrane transporter activity IEP Neighborhood
BP GO:0030198 extracellular matrix organization IEP Neighborhood
MF GO:0030570 pectate lyase activity IEP Neighborhood
CC GO:0031225 anchored component of membrane IEP Neighborhood
BP GO:0036211 protein modification process IEP Neighborhood
BP GO:0043062 extracellular structure organization IEP Neighborhood
BP GO:0043412 macromolecule modification IEP Neighborhood
BP GO:0044267 cellular protein metabolic process IEP Neighborhood
BP GO:0050896 response to stimulus IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
BP GO:0070838 divalent metal ion transport IEP Neighborhood
BP GO:0072348 sulfur compound transport IEP Neighborhood
BP GO:0072511 divalent inorganic cation transport IEP Neighborhood
MF GO:1901682 sulfur compound transmembrane transporter activity IEP Neighborhood
InterPro domains Description Start Stop
IPR022764 Peptidase_S54_rhomboid_dom 125 265
No external refs found!