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  5. AMTR_s00025p00243960

AMTR_s00025p00243960 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.379

Description : Cell cycle.regulation.cyclins.CYCT-type cyclin


Gene families : OG0000352 (Archaeplastida) Phylogenetic Tree(s): OG0000352_tree ,
OG_05_0008154 (LandPlants) Phylogenetic Tree(s): OG_05_0008154_tree ,
OG_06_0008624 (SeedPlants) Phylogenetic Tree(s): OG_06_0008624_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00243960
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AT4G19560 CYCT1;2 Cyclin family protein 0.02 Archaeplastida
Gb_08732 No alias cyclin (CYCT) 0.02 Archaeplastida
Pp3c2_24721V3.1 No alias Cyclin family protein 0.01 Archaeplastida
Pp3c2_24723V3.1 No alias Cyclin family protein 0.02 Archaeplastida
Pp3c9_26180V3.1 No alias arginine-rich cyclin 1 0.02 Archaeplastida
Smo140469 No alias RNA biosynthesis.RNA polymerase II-dependent... 0.03 Archaeplastida
Solyc09g075760.4.1 No alias cyclin (CYCT) 0.02 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP Neighborhood
MF GO:0003824 catalytic activity IEP Neighborhood
MF GO:0004842 ubiquitin-protein transferase activity IEP Neighborhood
BP GO:0006541 glutamine metabolic process IEP Neighborhood
MF GO:0008483 transaminase activity IEP Neighborhood
BP GO:0009064 glutamine family amino acid metabolic process IEP Neighborhood
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP Neighborhood
MF GO:0019787 ubiquitin-like protein transferase activity IEP Neighborhood
MF GO:0019842 vitamin binding IEP Neighborhood
MF GO:0030170 pyridoxal phosphate binding IEP Neighborhood
MF GO:0048037 cofactor binding IEP Neighborhood
MF GO:0050662 coenzyme binding IEP Neighborhood
MF GO:0070279 vitamin B6 binding IEP Neighborhood
BP GO:1901605 alpha-amino acid metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006671 Cyclin_N 203 343
No external refs found!