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  5. Solyc06g007510.3.1

Solyc06g007510.3.1


Description : conjugation E2 protein


Gene families : OG0000275 (Archaeplastida) Phylogenetic Tree(s): OG0000275_tree ,
OG_05_0000172 (LandPlants) Phylogenetic Tree(s): OG_05_0000172_tree ,
OG_06_0000190 (SeedPlants) Phylogenetic Tree(s): OG_06_0000190_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g007510.3.1
Cluster HCCA: Cluster_185

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00089p00061940 evm_27.TU.AmTr_v1... Protein degradation.peptide... 0.02 Archaeplastida
AT1G64230 UBC28 ubiquitin-conjugating enzyme 28 0.02 Archaeplastida
AT5G41700 ATUBC8, UBC8 ubiquitin conjugating enzyme 8 0.04 Archaeplastida
AT5G53300 UBC10 ubiquitin-conjugating enzyme 10 0.08 Archaeplastida
AT5G56150 UBC30 ubiquitin-conjugating enzyme 30 0.03 Archaeplastida
Cre06.g292800 No alias Protein degradation.peptide... 0.04 Archaeplastida
Cre16.g693700 No alias Protein degradation.peptide... 0.02 Archaeplastida
GSVIVT01019484001 No alias Protein degradation.peptide... 0.05 Archaeplastida
GSVIVT01025872001 No alias Protein degradation.peptide... 0.08 Archaeplastida
LOC_Os01g46926.1 No alias conjugation E2 protein 0.06 Archaeplastida
LOC_Os01g60410.3 No alias conjugation E2 protein 0.04 Archaeplastida
LOC_Os02g16040.1 No alias conjugation E2 protein 0.02 Archaeplastida
LOC_Os04g57220.2 No alias conjugation E2 protein 0.03 Archaeplastida
MA_108626g0020 No alias no hits & (original description: none) 0.06 Archaeplastida
Mp3g18170.1 No alias conjugation E2 protein 0.03 Archaeplastida
Mp5g21800.1 No alias conjugation E2 protein 0.06 Archaeplastida
Mp7g03500.1 No alias conjugation E2 protein. E2 conjugating component COP10... 0.04 Archaeplastida
Pp3c14_24450V3.1 No alias ubiquitin-conjugating enzyme 10 0.04 Archaeplastida
Pp3c24_130V3.1 No alias Ubiquitin-conjugating enzyme family protein 0.04 Archaeplastida
Zm00001e010614_P001 No alias E2 conjugating component COP10 of COP10-DET1 (CDD) subcomplex 0.04 Archaeplastida
Zm00001e019454_P001 No alias conjugation E2 protein 0.03 Archaeplastida
Zm00001e027303_P001 No alias conjugation E2 protein 0.05 Archaeplastida
Zm00001e028859_P002 No alias conjugation E2 protein 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0003723 RNA binding IEP Neighborhood
MF GO:0003743 translation initiation factor activity IEP Neighborhood
BP GO:0006413 translational initiation IEP Neighborhood
MF GO:0008121 ubiquinol-cytochrome-c reductase activity IEP Neighborhood
CC GO:0016459 myosin complex IEP Neighborhood
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP Neighborhood
MF GO:0016681 oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0019825 oxygen binding IEP Neighborhood
MF GO:0031072 heat shock protein binding IEP Neighborhood
CC GO:0044430 cytoskeletal part IEP Neighborhood
MF GO:0051082 unfolded protein binding IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP Neighborhood
InterPro domains Description Start Stop
IPR000608 UBQ-conjugat_E2 5 141
No external refs found!