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  5. Solyc06g007580.1.1

Solyc06g007580.1.1


Description : no hits & (original description: none)


Gene families : OG0000196 (Archaeplastida) Phylogenetic Tree(s): OG0000196_tree ,
OG_05_0000095 (LandPlants) Phylogenetic Tree(s): OG_05_0000095_tree ,
OG_06_0000549 (SeedPlants) Phylogenetic Tree(s): OG_06_0000549_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g007580.1.1
Cluster HCCA: Cluster_72

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00012p00212610 evm_27.TU.AmTr_v1... No description available 0.05 Archaeplastida
GSVIVT01005210001 No alias No description available 0.04 Archaeplastida
GSVIVT01020560001 No alias No description available 0.17 Archaeplastida
GSVIVT01026527001 No alias No description available 0.16 Archaeplastida
LOC_Os01g68650.1 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_29449g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_407685g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_41471g0010 No alias no hits & (original description: none) 0.03 Archaeplastida
MA_567674g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
MA_9190749g0010 No alias no hits & (original description: none) 0.02 Archaeplastida
Pp3c10_6220V3.1 No alias Protein of unknown function (DUF506) 0.03 Archaeplastida
Pp3c1_24500V3.1 No alias Protein of unknown function (DUF506) 0.04 Archaeplastida
Pp3c24_19270V3.1 No alias Protein of unknown function (DUF506) 0.03 Archaeplastida
Pp3c2_14090V3.1 No alias Protein of unknown function (DUF506) 0.05 Archaeplastida
Pp3c2_37210V3.1 No alias Protein of unknown function (DUF506) 0.02 Archaeplastida
Solyc02g078160.3.1 No alias no hits & (original description: none) 0.04 Archaeplastida
Zm00001e004776_P001 No alias no hits & (original description: none) 0.06 Archaeplastida
Zm00001e005992_P006 No alias no hits & (original description: none) 0.03 Archaeplastida
Zm00001e023428_P001 No alias no hits & (original description: none) 0.04 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Neighborhood
BP GO:0000160 phosphorelay signal transduction system IEP Neighborhood
MF GO:0004673 protein histidine kinase activity IEP Neighborhood
MF GO:0004812 aminoacyl-tRNA ligase activity IEP Neighborhood
BP GO:0006418 tRNA aminoacylation for protein translation IEP Neighborhood
BP GO:0006778 porphyrin-containing compound metabolic process IEP Neighborhood
BP GO:0006787 porphyrin-containing compound catabolic process IEP Neighborhood
BP GO:0015994 chlorophyll metabolic process IEP Neighborhood
BP GO:0015996 chlorophyll catabolic process IEP Neighborhood
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP Neighborhood
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP Neighborhood
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Neighborhood
MF GO:0016875 ligase activity, forming carbon-oxygen bonds IEP Neighborhood
BP GO:0033013 tetrapyrrole metabolic process IEP Neighborhood
BP GO:0033015 tetrapyrrole catabolic process IEP Neighborhood
BP GO:0042440 pigment metabolic process IEP Neighborhood
BP GO:0043038 amino acid activation IEP Neighborhood
BP GO:0043039 tRNA aminoacylation IEP Neighborhood
BP GO:0046149 pigment catabolic process IEP Neighborhood
MF GO:0047746 chlorophyllase activity IEP Neighborhood
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Neighborhood
BP GO:0051187 cofactor catabolic process IEP Neighborhood
MF GO:0051213 dioxygenase activity IEP Neighborhood
BP GO:0055114 oxidation-reduction process IEP Neighborhood
BP GO:1901565 organonitrogen compound catabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR006502 PDDEXK-like 66 251
No external refs found!