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Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.385
Description : RNA biosynthesis.transcriptional activation.MADS box transcription factor
Gene families : OG0000011 (Archaeplastida) Phylogenetic Tree(s): OG0000011_tree ,
OG_05_0000008 (LandPlants) Phylogenetic Tree(s): OG_05_0000008_tree ,
OG_06_0000013 (SeedPlants) Phylogenetic Tree(s): OG_06_0000013_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: AMTR_s00025p00244880 | |
| Cluster | HCCA: Cluster_82 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G77980 | AGL66 | AGAMOUS-like 66 | 0.03 | Archaeplastida | |
| AT2G42830 | SHP2, AGL5 | K-box region and MADS-box transcription factor family protein | 0.03 | Archaeplastida | |
| AT4G18960 | AG | K-box region and MADS-box transcription factor family protein | 0.02 | Archaeplastida | |
| AT5G60910 | AGL8, FUL | AGAMOUS-like 8 | 0.02 | Archaeplastida | |
| GSVIVT01010221001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | Archaeplastida | |
| GSVIVT01012110001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | Archaeplastida | |
| GSVIVT01014093001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | Archaeplastida | |
| GSVIVT01021534001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.02 | Archaeplastida | |
| GSVIVT01025945001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | Archaeplastida | |
| GSVIVT01026207001 | No alias | RNA biosynthesis.transcriptional activation.MADS box... | 0.04 | Archaeplastida | |
| Gb_16301 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| LOC_Os01g10504.1 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| LOC_Os06g11970.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| LOC_Os06g22760.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| MA_10256834g0010 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| MA_10432602g0010 | No alias | no hits & (original description: none) | 0.01 | Archaeplastida | |
| MA_175522g0010 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| MA_951956g0010 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| Pp3c9_1370V3.1 | No alias | AGAMOUS-like 66 | 0.02 | Archaeplastida | |
| Solyc01g106710.1.1 | No alias | component MED19 of head module of MEDIATOR transcription... | 0.02 | Archaeplastida | |
| Solyc01g106720.1.1 | No alias | transcription factor (MADS/AGL) | 0.01 | Archaeplastida | |
| Solyc01g150167.1.1 | No alias | MADS-box transcription factor 27 OS=Oryza sativa subsp.... | 0.01 | Archaeplastida | |
| Solyc02g091550.2.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Solyc05g012020.4.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Solyc06g069430.3.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Solyc10g080030.2.1 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Solyc12g056460.3.1 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| Zm00001e003667_P001 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| Zm00001e006950_P001 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| Zm00001e015447_P001 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| Zm00001e026007_P004 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Zm00001e030373_P001 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida | |
| Zm00001e031267_P003 | No alias | transcription factor (MADS/AGL) | 0.02 | Archaeplastida | |
| Zm00001e039774_P001 | No alias | transcription factor (MADS/AGL) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003677 | DNA binding | IEA | Interproscan |
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0004175 | endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004190 | aspartic-type endopeptidase activity | IEP | Neighborhood |
| MF | GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds | IEP | Neighborhood |
| MF | GO:0004650 | polygalacturonase activity | IEP | Neighborhood |
| BP | GO:0006508 | proteolysis | IEP | Neighborhood |
| MF | GO:0008233 | peptidase activity | IEP | Neighborhood |
| MF | GO:0016787 | hydrolase activity | IEP | Neighborhood |
| MF | GO:0016798 | hydrolase activity, acting on glycosyl bonds | IEP | Neighborhood |
| BP | GO:0019538 | protein metabolic process | IEP | Neighborhood |
| MF | GO:0045735 | nutrient reservoir activity | IEP | Neighborhood |
| MF | GO:0070001 | aspartic-type peptidase activity | IEP | Neighborhood |
| MF | GO:0070011 | peptidase activity, acting on L-amino acid peptides | IEP | Neighborhood |
| MF | GO:0140096 | catalytic activity, acting on a protein | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR002100 | TF_MADSbox | 9 | 57 |
| No external refs found! |