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Description : transcription factor (bHLH). PIF red/far-red light perception transcriptional regulator
Gene families : OG0000092 (Archaeplastida) Phylogenetic Tree(s): OG0000092_tree ,
OG_05_0000040 (LandPlants) Phylogenetic Tree(s): OG_05_0000040_tree ,
OG_06_0000031 (SeedPlants) Phylogenetic Tree(s): OG_06_0000031_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: Solyc06g008030.3.1 | |
| Cluster | HCCA: Cluster_181 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AT1G02340 | HFR1, FBI1, REP1, RSF1 | basic helix-loop-helix (bHLH) DNA-binding superfamily protein | 0.02 | Archaeplastida | |
| AT1G66470 | RHD6 | ROOT HAIR DEFECTIVE6 | 0.02 | Archaeplastida | |
| AT2G43010 | SRL2, PIF4, AtPIF4 | phytochrome interacting factor 4 | 0.03 | Archaeplastida | |
| AT5G37800 | ATRSL1, RSL1 | RHD SIX-LIKE 1 | 0.02 | Archaeplastida | |
| GSVIVT01018164001 | No alias | Transcription factor UNE10 OS=Arabidopsis thaliana | 0.03 | Archaeplastida | |
| LOC_Os02g48060.1 | No alias | transcription factor (bHLH) | 0.07 | Archaeplastida | |
| LOC_Os08g01700.1 | No alias | transcription factor (bHLH) | 0.02 | Archaeplastida | |
| MA_100071g0010 | No alias | no hits & (original description: none) | 0.03 | Archaeplastida | |
| Pp3c16_21590V3.1 | No alias | ROOT HAIR DEFECTIVE 6-LIKE 2 | 0.03 | Archaeplastida | |
| Solyc02g091440.2.1 | No alias | transcription factor (bHLH) | 0.03 | Archaeplastida |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0046983 | protein dimerization activity | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0008080 | N-acetyltransferase activity | IEP | Neighborhood |
| CC | GO:0009507 | chloroplast | IEP | Neighborhood |
| CC | GO:0009536 | plastid | IEP | Neighborhood |
| MF | GO:0016407 | acetyltransferase activity | IEP | Neighborhood |
| MF | GO:0016410 | N-acyltransferase activity | IEP | Neighborhood |
| MF | GO:0016830 | carbon-carbon lyase activity | IEP | Neighborhood |
| MF | GO:0016831 | carboxy-lyase activity | IEP | Neighborhood |
| MF | GO:0030599 | pectinesterase activity | IEP | Neighborhood |
| BP | GO:0042545 | cell wall modification | IEP | Neighborhood |
| MF | GO:0042910 | xenobiotic transmembrane transporter activity | IEP | Neighborhood |
| BP | GO:0045229 | external encapsulating structure organization | IEP | Neighborhood |
| BP | GO:0071554 | cell wall organization or biogenesis | IEP | Neighborhood |
| BP | GO:0071555 | cell wall organization | IEP | Neighborhood |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR011598 | bHLH_dom | 307 | 353 |
| No external refs found! |