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  5. Solyc06g008220.4.1

Solyc06g008220.4.1


Description : RNA editing factor (MORF)


Gene families : OG0005406 (Archaeplastida) Phylogenetic Tree(s): OG0005406_tree ,
OG_05_0003669 (LandPlants) Phylogenetic Tree(s): OG_05_0003669_tree ,
OG_06_0002290 (SeedPlants) Phylogenetic Tree(s): OG_06_0002290_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g008220.4.1
Cluster HCCA: Cluster_119

Target Alias Description ECC score Gene Family Method Actions
GSVIVT01027872001 No alias RNA processing.organelle machineries.RNA... 0.05 Archaeplastida
GSVIVT01028387001 No alias RNA processing.organelle machineries.RNA... 0.03 Archaeplastida
LOC_Os04g51280.1 No alias RNA editing factor (MORF) 0.07 Archaeplastida
Zm00001e029854_P001 No alias RNA editing factor (MORF) 0.04 Archaeplastida
Zm00001e036654_P001 No alias RNA editing factor (MORF) 0.03 Archaeplastida
Zm00001e041577_P001 No alias RNA editing factor (MORF) 0.07 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000774 adenyl-nucleotide exchange factor activity IEP Neighborhood
MF GO:0003676 nucleic acid binding IEP Neighborhood
MF GO:0004784 superoxide dismutase activity IEP Neighborhood
BP GO:0006353 DNA-templated transcription, termination IEP Neighborhood
BP GO:0006457 protein folding IEP Neighborhood
BP GO:0006801 superoxide metabolic process IEP Neighborhood
BP GO:0009059 macromolecule biosynthetic process IEP Neighborhood
MF GO:0016721 oxidoreductase activity, acting on superoxide radicals as acceptor IEP Neighborhood
MF GO:0019843 rRNA binding IEP Neighborhood
MF GO:0042802 identical protein binding IEP Neighborhood
MF GO:0042803 protein homodimerization activity IEP Neighborhood
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP Neighborhood
MF GO:0051087 chaperone binding IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
MF GO:0060590 ATPase regulator activity IEP Neighborhood
MF GO:0071949 FAD binding IEP Neighborhood
BP GO:0072593 reactive oxygen species metabolic process IEP Neighborhood

No InterPro domains available for this sequence

No external refs found!