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  5. Solyc06g008240.3.1

Solyc06g008240.3.1


Description : GTPase effector (RIC)


Gene families : OG0001059 (Archaeplastida) Phylogenetic Tree(s): OG0001059_tree ,
OG_05_0000659 (LandPlants) Phylogenetic Tree(s): OG_05_0000659_tree ,
OG_06_0000439 (SeedPlants) Phylogenetic Tree(s): OG_06_0000439_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g008240.3.1
Cluster HCCA: Cluster_151

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00067p00100470 evm_27.TU.AmTr_v1... Multi-process regulation.Rop GTPase regulatory... 0.05 Archaeplastida
AT1G03982 No alias PAK-box/P21-Rho-binding family protein 0.04 Archaeplastida
AT1G04450 RIC3 ROP-interactive CRIB motif-containing protein 3 0.03 Archaeplastida
AT2G20430 RIC6 ROP-interactive CRIB motif-containing protein 6 0.06 Archaeplastida
AT2G33460 RIC1 ROP-interactive CRIB motif-containing protein 1 0.04 Archaeplastida
AT3G23380 RIC5 ROP-interactive CRIB motif-containing protein 5 0.03 Archaeplastida
AT4G28556 RIC7 PAK-box/P21-Rho-binding family protein 0.04 Archaeplastida
LOC_Os07g26480.2 No alias GTPase effector (RIC) 0.07 Archaeplastida
Solyc09g098425.1.1 No alias GTPase effector (RIC) 0.03 Archaeplastida
Zm00001e006356_P004 No alias GTPase effector (RIC) 0.02 Archaeplastida
Zm00001e009549_P001 No alias GTPase effector (RIC) 0.03 Archaeplastida
Zm00001e033401_P001 No alias GTPase effector (RIC) 0.03 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP Neighborhood
MF GO:0005092 GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005094 Rho GDP-dissociation inhibitor activity IEP Neighborhood
MF GO:0005319 lipid transporter activity IEP Neighborhood
MF GO:0005543 phospholipid binding IEP Neighborhood
MF GO:0005544 calcium-dependent phospholipid binding IEP Neighborhood
CC GO:0005737 cytoplasm IEP Neighborhood
BP GO:0006468 protein phosphorylation IEP Neighborhood
BP GO:0006810 transport IEP Neighborhood
BP GO:0006869 lipid transport IEP Neighborhood
CC GO:0016021 integral component of membrane IEP Neighborhood
MF GO:0016301 kinase activity IEP Neighborhood
BP GO:0016310 phosphorylation IEP Neighborhood
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Neighborhood
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Neighborhood
MF GO:0030695 GTPase regulator activity IEP Neighborhood
CC GO:0031224 intrinsic component of membrane IEP Neighborhood
CC GO:0044425 membrane part IEP Neighborhood
BP GO:0051179 localization IEP Neighborhood
BP GO:0051234 establishment of localization IEP Neighborhood
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP Neighborhood
BP GO:0061024 membrane organization IEP Neighborhood
BP GO:0120009 intermembrane lipid transfer IEP Neighborhood
MF GO:0120013 intermembrane lipid transfer activity IEP Neighborhood
InterPro domains Description Start Stop
IPR000095 CRIB_dom 28 60
No external refs found!