AMTR_s00025p00245990 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00025.391

Description : (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana


Gene families : OG0000176 (Archaeplastida) Phylogenetic Tree(s): OG0000176_tree ,
OG_05_0010927 (LandPlants) Phylogenetic Tree(s): OG_05_0010927_tree ,
OG_06_0007616 (SeedPlants) Phylogenetic Tree(s): OG_06_0007616_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00025p00245990
Cluster HCCA: Cluster_47

Target Alias Description ECC score Gene Family Method Actions
MA_10307468g0010 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana... 0.02 Archaeplastida
Pp3c9_16990V3.1 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.02 Archaeplastida
Pp3c9_17010V3.1 No alias Glucose-methanol-choline (GMC) oxidoreductase family protein 0.01 Archaeplastida
Smo235799 No alias (R)-mandelonitrile lyase-like OS=Arabidopsis thaliana 0.02 Archaeplastida
Smo429523 No alias Protein HOTHEAD OS=Arabidopsis thaliana 0.02 Archaeplastida
Zm00001e002156_P001 No alias Protein HOTHEAD OS=Arabidopsis thaliana... 0.02 Archaeplastida

Type GO Term Name Evidence Source
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEA Interproscan
MF GO:0050660 flavin adenine dinucleotide binding IEA Interproscan
BP GO:0055114 oxidation-reduction process IEA Interproscan
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP Neighborhood
BP GO:0006304 DNA modification IEP Neighborhood
BP GO:0006305 DNA alkylation IEP Neighborhood
BP GO:0006306 DNA methylation IEP Neighborhood
MF GO:0008168 methyltransferase activity IEP Neighborhood
MF GO:0008171 O-methyltransferase activity IEP Neighborhood
MF GO:0016741 transferase activity, transferring one-carbon groups IEP Neighborhood
BP GO:0032259 methylation IEP Neighborhood
BP GO:0043414 macromolecule methylation IEP Neighborhood
BP GO:0044728 DNA methylation or demethylation IEP Neighborhood
InterPro domains Description Start Stop
IPR000172 GMC_OxRdtase_N 183 310
IPR000172 GMC_OxRdtase_N 30 125
IPR007867 GMC_OxRtase_C 378 521
No external refs found!