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  5. Solyc06g009620.1.1

Solyc06g009620.1.1


Description : Pentatricopeptide repeat-containing protein At1g09220, mitochondrial OS=Arabidopsis thaliana (sp|q680z7|ppr24_arath : 454.0)


Gene families : OG0014095 (Archaeplastida) Phylogenetic Tree(s): OG0014095_tree ,
OG_05_0015691 (LandPlants) Phylogenetic Tree(s): OG_05_0015691_tree ,
OG_06_0014091 (SeedPlants) Phylogenetic Tree(s): OG_06_0014091_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc06g009620.1.1
Cluster HCCA: Cluster_207

Target Alias Description ECC score Gene Family Method Actions
AT1G09220 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 Archaeplastida
GSVIVT01012620001 No alias Pentatricopeptide repeat-containing protein At1g09220,... 0.03 Archaeplastida
GSVIVT01015793001 No alias No description available 0.06 Archaeplastida

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003697 single-stranded DNA binding IEP Neighborhood
MF GO:0005488 binding IEP Neighborhood
BP GO:0006777 Mo-molybdopterin cofactor biosynthetic process IEP Neighborhood
MF GO:0008270 zinc ion binding IEP Neighborhood
BP GO:0019720 Mo-molybdopterin cofactor metabolic process IEP Neighborhood
MF GO:0043167 ion binding IEP Neighborhood
MF GO:0043169 cation binding IEP Neighborhood
BP GO:0043545 molybdopterin cofactor metabolic process IEP Neighborhood
MF GO:0046872 metal ion binding IEP Neighborhood
MF GO:0046914 transition metal ion binding IEP Neighborhood
BP GO:0051189 prosthetic group metabolic process IEP Neighborhood
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 286 334
IPR002885 Pentatricopeptide_repeat 181 222
IPR002885 Pentatricopeptide_repeat 362 381
IPR002885 Pentatricopeptide_repeat 125 150
IPR002885 Pentatricopeptide_repeat 258 281
No external refs found!